RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 ASTLQ6HA08 431 aaPredicted RBP11.65□□□□□ -0.54
GPNMB-206ENST00000465673 FAM43BQ6ZT52 329 aaPredicted RBP11.65□□□□□ -0.54
GPNMB-206ENST00000465673 SMAP1Q8IYB5 467 aaPredicted RBP11.65□□□□□ -0.54
GPNMB-206ENST00000465673 ZNF713Q8N859 430 aaPredicted RBP11.65□□□□□ -0.54
GPNMB-206ENST00000465673 TDRD5Q8NAT2 981 aaKnown RBP11.65□□□□□ -0.54
GPNMB-206ENST00000465673 FLCNQ8NFG4 579 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 SLC22A17Q8WUG5 538 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 NLRP7Q8WX94 980 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 TMEM169Q96HH4 297 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 NECTIN4Q96NY8 510 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 VN1R3Q9BXE9 311 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 ZMYND12Q9H0C1 365 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 ZBP1Q9H171 429 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 IRF2BPLQ9H1B7 796 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 GLT8D2Q9H1C3 349 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 NRDE2Q9H7Z3 1164 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 DISC1Q9NRI5 854 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 DNAJB4Q9UDY4 337 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 DBR1Q9UK59 544 aaKnown RBP11.65□□□□□ -0.54
GPNMB-206ENST00000465673 INPP5FQ9Y2H2 1132 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 FAM186AA6NE01 2351 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 DMDP11532 3685 aa11.65□□□□□ -0.54
GPNMB-206ENST00000465673 A0A087WZ62 844 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 WDR64B1ANS9 1081 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 MSH4O15457 936 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 EOMESO95936 686 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 GALTP07902 379 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 MYBP10242 640 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 NBL1P41271 181 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 SETQ01105 290 aaPredicted RBP11.64□□□□□ -0.55
GPNMB-206ENST00000465673 ATAT1Q5SQI0 421 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 CWF19L1Q69YN2 538 aaKnown RBP11.64□□□□□ -0.55
GPNMB-206ENST00000465673 KIAA1841Q6NSI8 718 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 KSR1Q8IVT5 923 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 TEX2Q8IWB9 1127 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 ZDHHC14Q8IZN3 488 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 REXO1Q8N1G1 1221 aaKnown RBP11.64□□□□□ -0.55
GPNMB-206ENST00000465673 TMEM87AQ8NBN3 555 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 PHKBQ93100 1093 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 IGSF21Q96ID5 467 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 FAM167AQ96KS9 214 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 FDXACB1Q9BRP7 624 aaPredicted RBP11.64□□□□□ -0.55
GPNMB-206ENST00000465673 GBP3Q9H0R5 595 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 UNC45AQ9H3U1 944 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 MFSD1Q9H3U5 465 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 NRBP2Q9NSY0 501 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 TBC1D13Q9NVG8 400 aa11.64□□□□□ -0.55
GPNMB-206ENST00000465673 ESYT2A0FGR8 921 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 STBD1O95210 358 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 SSBP05455 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
GPNMB-206ENST00000465673 CTSAP10619 480 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 NPR3P17342 541 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 CIITAP33076 1130 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 PHKA2P46019 1235 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 SLC11A1P49279 550 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 AFF1P51825 1210 aaKnown RBP11.63□□□□□ -0.55
GPNMB-206ENST00000465673 NUBP1P53384 320 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 TBC1D8BQ0IIM8 1120 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 TARBP2Q15633 366 aaKnown RBP11.63□□□□□ -0.55
GPNMB-206ENST00000465673 MTERF2Q49AM1 385 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 RNF20Q5VTR2 975 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 TWF2Q6IBS0 349 aaKnown RBP11.63□□□□□ -0.55
GPNMB-206ENST00000465673 CABP7Q86V35 215 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 ZNF280BQ86YH2 543 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 CCDC136Q96JN2 1154 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 CEP89Q96ST8 783 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 C6orf50Q9HD87 102 aa11.63□□□□□ -0.55
GPNMB-206ENST00000465673 SEPT9Q9UHD8 586 aaPredicted RBP11.63□□□□□ -0.55
GPNMB-206ENST00000465673 WDR81Q562E7 1941 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 VPS13AQ96RL7 3174 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 NARSO43776 548 aaKnown RBP11.62□□□□□ -0.55
GPNMB-206ENST00000465673 GAS7O60861 476 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 OFD1O75665 1012 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 DDHD2O94830 711 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 PTPN14Q15678 1187 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 NOMO2Q5JPE7 1267 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 DDX53Q86TM3 631 aaKnown RBP11.62□□□□□ -0.55
GPNMB-206ENST00000465673 RHPN2Q8IUC4 686 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 SLC5A5Q92911 643 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 KLHL5Q96PQ7 755 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 MRPL9Q9BYD2 267 aaKnown RBP11.62□□□□□ -0.55
GPNMB-206ENST00000465673 GCOM2Q9BZD3 368 aaPredicted RBP11.62□□□□□ -0.55
GPNMB-206ENST00000465673 CYP26B1Q9NR63 512 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 FAM105AQ9NUU6 356 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 DZANK1Q9NVP4 752 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 DACT1Q9NYF0 836 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 VPS54Q9P1Q0 977 aa11.62□□□□□ -0.55
GPNMB-206ENST00000465673 PIN4Q9Y237 131 aaKnown RBP11.62□□□□□ -0.55
GPNMB-206ENST00000465673 GVINP1Q7Z2Y8 2422 aa11.61□□□□□ -0.55
GPNMB-206ENST00000465673 PRPF3O43395 683 aaKnown RBP11.61□□□□□ -0.55
GPNMB-206ENST00000465673 CNPP09543 421 aaKnown RBP11.61□□□□□ -0.55
GPNMB-206ENST00000465673 CLCN5P51795 746 aa11.61□□□□□ -0.55
GPNMB-206ENST00000465673 FGD1P98174 961 aa11.61□□□□□ -0.55
GPNMB-206ENST00000465673 RNASELQ05823 741 aaKnown RBP11.61□□□□□ -0.55
GPNMB-206ENST00000465673 BMS1Q14692 1282 aaKnown RBP11.61□□□□□ -0.55
GPNMB-206ENST00000465673 TSGA10IPQ3SY00 556 aa11.61□□□□□ -0.55
GPNMB-206ENST00000465673 LRCH2Q5VUJ6 765 aa11.61□□□□□ -0.55
GPNMB-206ENST00000465673 GLB1LQ6UWU2 654 aa11.61□□□□□ -0.55
GPNMB-206ENST00000465673 Q6ZUG5 572 aa11.61□□□□□ -0.55
GPNMB-206ENST00000465673 GPR149Q86SP6 731 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms