RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 PLA2G4BP0C869 781 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 ABCD1P33897 745 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 ME1P48163 572 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 EFNA5P52803 228 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 CDCA2Q69YH5 1023 aaPredicted RBP15.19■□□□□ 0.02
LIMD1-203ENST00000465039 RINT1Q6NUQ1 792 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 C1orf186Q6ZWK4 172 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 KCNK18Q7Z418 384 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 FAM228AQ86W67 206 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 RNF149Q8NC42 400 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 LEO1Q8WVC0 666 aaPredicted RBP15.19■□□□□ 0.02
LIMD1-203ENST00000465039 LARP4BQ92615 738 aaKnown RBP15.19■□□□□ 0.02
LIMD1-203ENST00000465039 RAD54LQ92698 747 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 CCDC51Q96ER9 411 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 EPSTI1Q96J88 318 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 SPATA32Q96LK8 384 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 PRIMPOLQ96LW4 560 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 NLRP4Q96MN2 994 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 FDXACB1Q9BRP7 624 aaPredicted RBP15.19■□□□□ 0.02
LIMD1-203ENST00000465039 POLR3FQ9H1D9 316 aaPredicted RBP15.19■□□□□ 0.02
LIMD1-203ENST00000465039 DACT1Q9NYF0 836 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 ST3GAL5Q9UNP4 418 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 PCDHA11Q9Y5I1 949 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 GLRA2P23416 452 aa15.18■□□□□ 0.02
LIMD1-203ENST00000465039 AXLP30530 894 aa15.18■□□□□ 0.02
LIMD1-203ENST00000465039 CAPSQ13938 189 aa15.18■□□□□ 0.02
LIMD1-203ENST00000465039 KARSQ15046 597 aaKnown RBP15.18■□□□□ 0.02
LIMD1-203ENST00000465039 ADALQ6DHV7 355 aa15.18■□□□□ 0.02
LIMD1-203ENST00000465039 FAM109BQ6ICB4 259 aaPredicted RBP15.18■□□□□ 0.02
LIMD1-203ENST00000465039 HERC6Q8IVU3 1022 aa15.18■□□□□ 0.02
LIMD1-203ENST00000465039 IFT74Q96LB3 600 aa15.18■□□□□ 0.02
LIMD1-203ENST00000465039 CLIC6Q96NY7 704 aa15.18■□□□□ 0.02
LIMD1-203ENST00000465039 LRRC27Q9C0I9 530 aa15.18■□□□□ 0.02
LIMD1-203ENST00000465039 CDHR5Q9HBB8 845 aa15.18■□□□□ 0.02
LIMD1-203ENST00000465039 RGS18Q9NS28 235 aa15.18■□□□□ 0.02
LIMD1-203ENST00000465039 BLOC1S4Q9NUP1 217 aa15.18■□□□□ 0.02
LIMD1-203ENST00000465039 LAMA2P24043 3122 aaKnown RBP15.18■□□□□ 0.02
LIMD1-203ENST00000465039 A0A1W2PQ27 194 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 A0A1W2PQ64 194 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 A0A1W2PQD8 194 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 H0YCG3 227 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 GJB5O95377 273 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 SKIP12755 728 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 RAB27AP51159 221 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 NCBP1Q09161 790 aaKnown RBP15.17■□□□□ 0.02
LIMD1-203ENST00000465039 DSC3Q14574 896 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 ZRSR1Q15695 479 aaKnown RBP15.17■□□□□ 0.02
LIMD1-203ENST00000465039 FAM187BQ17R55 369 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 FAM102BQ5T8I3 360 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 RRAGBQ5VZM2 374 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 RESP18Q5W5W9 173 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 SHC4Q6S5L8 630 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 USP49Q70CQ1 688 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 SLC24A5Q71RS6 500 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 ZBTB8OSQ8IWT0 167 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 IQUBQ8NA54 791 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 SLC17A8Q8NDX2 589 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 ASAP3Q8TDY4 903 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 SPIRE2Q8WWL2 714 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 TOP1MTQ969P6 601 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 NTPCRQ9BSD7 190 aaKnown RBP15.17■□□□□ 0.02
LIMD1-203ENST00000465039 RUSC1Q9BVN2 902 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 TMX1Q9H3N1 280 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 ELAC1Q9H777 363 aaKnown RBP15.17■□□□□ 0.02
LIMD1-203ENST00000465039 AGPAT5Q9NUQ2 364 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 FAM13BQ9NYF5 915 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 CHMP5Q9NZZ3 219 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 LARSQ9P2J5 1176 aaKnown RBP15.17■□□□□ 0.02
LIMD1-203ENST00000465039 PCDHA7Q9UN72 937 aa15.17■□□□□ 0.02
LIMD1-203ENST00000465039 RBM19Q9Y4C8 960 aaKnown RBP15.17■□□□□ 0.02
LIMD1-203ENST00000465039 FAM237AA0A1B0GTK4 181 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.16■□□□□ 0.02
LIMD1-203ENST00000465039 DENND3A2RUS2 1198 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 ENPP3O14638 875 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 STAG3L1P0CL83 205 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 ZSCAN20P17040 1043 aaPredicted RBP15.16■□□□□ 0.02
LIMD1-203ENST00000465039 NCLP19338 710 aaKnown RBP15.16■□□□□ 0.02
LIMD1-203ENST00000465039 CMA1P23946 247 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 STAT6P42226 847 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 ZNF131P52739 623 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 HTRA4P83105 476 aaPredicted RBP15.16■□□□□ 0.02
LIMD1-203ENST00000465039 NFX1Q12986 1120 aaKnown RBP15.16■□□□□ 0.02
LIMD1-203ENST00000465039 MAPK7Q13164 816 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 DMP1Q13316 513 aaPredicted RBP15.16■□□□□ 0.02
LIMD1-203ENST00000465039 CSPP1Q1MSJ5 1256 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 TCTN1Q2MV58 587 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 NAALADL2Q58DX5 795 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 NPAS4Q8IUM7 802 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 KSR1Q8IVT5 923 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 DAW1Q8N136 415 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 CRIPAKQ8N1N5 446 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 OSBPL7Q9BZF2 842 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 TNMDQ9H2S6 317 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 BMP2KQ9NSY1 1161 aaPredicted RBP15.16■□□□□ 0.02
LIMD1-203ENST00000465039 PRMT7Q9NVM4 692 aaPredicted RBP15.16■□□□□ 0.02
LIMD1-203ENST00000465039 PCDH10Q9P2E7 1040 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 USP25Q9UHP3 1055 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 MSRAQ9UJ68 235 aa15.16■□□□□ 0.02
LIMD1-203ENST00000465039 ZMYM2Q9UBW7 1377 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms