RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TBC1D5Q92609 795 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 LARP4BQ92615 738 aaKnown RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 TLCD1Q96CP7 247 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 MTMR8Q96EF0 704 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 NLRP3Q96P20 1036 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 RIOK1Q9BRS2 568 aaKnown RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 LSM14BQ9BX40 385 aaKnown RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 SPZ1Q9BXG8 430 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 ZMYND12Q9H0C1 365 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 SEMA6BQ9H3T3 888 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 RABEP2Q9H5N1 569 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 EBF2Q9HAK2 575 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 METTL14Q9HCE5 456 aaKnown RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 ARHGEF10LQ9HCE6 1279 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 INCENPQ9NQS7 918 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 HAUS2Q9NVX0 235 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 AMFRQ9UKV5 643 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 NOVA2Q9UNW9 492 aaKnown RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 RPL26L1Q9UNX3 145 aaKnown RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 C15orf41Q9Y2V0 281 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 KIAA1551Q9HCM1 1747 aa7.8□□□□□ -1.16
CLSTN1-204ENST00000464286 FLT1P17948 1338 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 F8VZ95 297 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 H0YGN5 161 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 M0R2N6 131 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 TRAF5O00463 557 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 NCK2O43639 380 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 BUB1O43683 1085 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 HNRNPCL1O60812 293 aaKnown RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 COBLO75128 1261 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 GNRH1P01148 92 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 FAM153BP0C7A2 387 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 PRKCIP41743 596 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 RASSF2P50749 326 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 MAGOHP61326 146 aaKnown RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 ELF3P78545 371 aaPredicted RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 VAC14Q08AM6 782 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 POU4F2Q12837 409 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 RAPGEF1Q13905 1077 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 ZNF268Q14587 947 aaPredicted RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 FAM153CQ494X1 144 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 CMPK2Q5EBM0 449 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 AP1ARQ63HQ0 302 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 HGSNATQ68CP4 663 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 HIBCHQ6NVY1 386 aaPredicted RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 TRPM8Q7Z2W7 1104 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 HEATR3Q7Z4Q2 680 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 TMC3Q7Z5M5 1100 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 FRMD5Q7Z6J6 570 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 LMNTD2Q8IXW0 634 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 ZNF34Q8IZ26 560 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 MIGA1Q8NAN2 632 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 FBF1Q8TES7 1133 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 ATXN2LQ8WWM7 1075 aaKnown RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 RAD54LQ92698 747 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 MAGOHBQ96A72 148 aaKnown RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 SAAL1Q96ER3 474 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 OSBPL7Q9BZF2 842 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 TMX4Q9H1E5 349 aaPredicted RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 CARD9Q9H257 536 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 PABPC3Q9H361 631 aaKnown RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 TXLNGQ9NUQ3 528 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 INTS9Q9NV88 658 aaKnown RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 CPSF2Q9P2I0 782 aaKnown RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 ABCF2Q9UG63 623 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 FAM153AQ9UHL3 310 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 BAIAP2L1Q9UHR4 511 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 HDAC9Q9UKV0 1011 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 CORO1CQ9ULV4 474 aaPredicted RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 SLC12A4Q9UP95 1085 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 ZNF652Q9Y2D9 606 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 NOC2LQ9Y3T9 749 aaKnown RBP7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 NFS1Q9Y697 457 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 MYH7BA7E2Y1 1941 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 ROBO3Q96MS0 1386 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 MYH4Q9Y623 1939 aa7.79□□□□□ -1.16
CLSTN1-204ENST00000464286 PFASO15067 1338 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 SYNGAP1Q96PV0 1343 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 GTPBP10A4D1E9 387 aaKnown RBP7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 MIF4GDA9UHW6 222 aaKnown RBP7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 STXBP3O00186 592 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 NDC80O14777 642 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 CALUO43852 315 aaPredicted RBP7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 CCNT1O60563 726 aaKnown RBP7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 FTCDO95954 541 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 LMNAP02545 664 aaKnown RBP7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 MMEP08473 750 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 PLEKP08567 350 aaPredicted RBP7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 ALADP13716 330 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 RFX1P22670 979 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 BRD2P25440 801 aaKnown RBP7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 KLRC1P26715 233 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 CHRNA3P32297 505 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 MAN1A1P33908 653 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 GCKP35557 465 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 MMP13P45452 471 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 KLK7P49862 253 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 CCNG1P51959 295 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 PMS2P54278 862 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms