RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CDK17Q00537 523 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 FKBP3Q00688 224 aaKnown RBP15.93■□□□□ 0.14
COL5A1-205ENST00000464187 CCL14Q16627 93 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 XKR3Q5GH77 459 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 RSRC2Q7L4I2 434 aaKnown RBP15.93■□□□□ 0.14
COL5A1-205ENST00000464187 NELFCDQ8IXH7 590 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 CEP170P1Q96L14 293 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 APBA2Q99767 749 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 KCTD10Q9H3F6 313 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 NHEJ1Q9H9Q4 299 aaPredicted RBP15.93■□□□□ 0.14
COL5A1-205ENST00000464187 PARVGQ9HBI0 331 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 ZNHIT6Q9NWK9 470 aaKnown RBP15.93■□□□□ 0.14
COL5A1-205ENST00000464187 SEPT9Q9UHD8 586 aaPredicted RBP15.93■□□□□ 0.14
COL5A1-205ENST00000464187 DOCK3Q8IZD9 2030 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 HIP1RO75146 1068 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 CYLC1P35663 651 aaPredicted RBP15.92■□□□□ 0.14
COL5A1-205ENST00000464187 MAP2K2P36507 400 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 VEGFBP49765 207 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 ZNF131P52739 623 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 ARHGAP1Q07960 439 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 FAM160B1Q5W0V3 765 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 MAEAQ7L5Y9 396 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 ZC3H3Q8IXZ2 948 aaKnown RBP15.92■□□□□ 0.14
COL5A1-205ENST00000464187 AFAP1L1Q8TED9 768 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 CEP63Q96MT8 703 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 NAPGQ99747 312 aaPredicted RBP15.92■□□□□ 0.14
COL5A1-205ENST00000464187 AZI2Q9H6S1 392 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 CDC23Q9UJX2 597 aa15.92■□□□□ 0.14
COL5A1-205ENST00000464187 GH1P01241 217 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 OATP04181 439 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 GAP43P17677 238 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 HNRNPH3P31942 346 aaKnown RBP15.91■□□□□ 0.14
COL5A1-205ENST00000464187 LAMC2Q13753 1193 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 PRAMEF19Q5SWL8 479 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 OLFML2BQ68BL8 750 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 ZNF662Q6ZS27 426 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 CCDC170Q8IYT3 715 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 DAW1Q8N136 415 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 MYCT1Q8N699 235 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 HAUS4Q9H6D7 363 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 OLFML3Q9NRN5 406 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 FAM207AQ9NSI2 230 aaPredicted RBP15.91■□□□□ 0.14
COL5A1-205ENST00000464187 ZNF446Q9NWS9 450 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 EIF3CLB5ME19 914 aaKnown RBP15.91■□□□□ 0.14
COL5A1-205ENST00000464187 TRPA1O75762 1119 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 SMPD1P17405 629 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 CYP2C19P33261 490 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 CLCN6P51797 869 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 CASP5P51878 434 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 KRT83P78385 493 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 CBX1P83916 185 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 MAPK7Q13164 816 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 CCDC40Q4G0X9 1142 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 GLG1Q92896 1179 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 EIF3CQ99613 913 aaKnown RBP15.91■□□□□ 0.14
COL5A1-205ENST00000464187 MMRN2Q9H8L6 949 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 CYP26B1Q9NR63 512 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 GUCA1BQ9UMX6 200 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 TFR2Q9UP52 801 aa15.91■□□□□ 0.14
COL5A1-205ENST00000464187 LGR5O75473 907 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 KIF20AO95235 890 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 MARSP56192 900 aaKnown RBP15.9■□□□□ 0.14
COL5A1-205ENST00000464187 SP3Q02447 781 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 KCNMA1Q12791 1236 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 TUBB2AQ13885 445 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 MTERF2Q49AM1 385 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 DUSP28Q4G0W2 176 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 TEX35Q5T0J7 233 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 IQSEC1Q6DN90 963 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 TRIM50Q86XT4 487 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 CCDC155Q8N6L0 562 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 EMID1Q96A84 441 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-205ENST00000464187 TUBB2BQ9BVA1 445 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 TIPINQ9BVW5 301 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 CFHR5Q9BXR6 569 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 RNF186Q9NXI6 227 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 OGFRQ9NZT2 677 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 SEL1LQ9UBV2 794 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 PLAGL2Q9UPG8 496 aa15.9■□□□□ 0.14
COL5A1-205ENST00000464187 GNA14O95837 355 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 PLEKP08567 350 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-205ENST00000464187 IRF5Q13568 498 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 ODR4Q5SWX8 454 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 EPM2AIP1Q7L775 607 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-205ENST00000464187 PLPPR4Q7Z2D5 763 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 SRGAP1Q7Z6B7 1085 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 KIAA1328Q86T90 577 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 TRIM59Q8IWR1 403 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 PPTC7Q8NI37 304 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 BAP1Q92560 729 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 GOLGA1Q92805 767 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 JAKMIP2Q96AA8 810 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 FIZ1Q96SL8 496 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 EPC1Q9H2F5 836 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 LARSQ9P2J5 1176 aaKnown RBP15.89■□□□□ 0.13
COL5A1-205ENST00000464187 EMSYQ7Z589 1322 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 RCCD1A6NED2 376 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 ADCY6O43306 1168 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms