RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 TLR3O15455 904 aaKnown RBP15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 SMC2O95347 1197 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 RPLP2P05387 115 aaKnown RBP15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 NAMPTP43490 491 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 NCKAP1LP55160 1127 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 NLRP11P59045 1033 aaKnown RBP15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 HERC4Q5GLZ8 1057 aaPredicted RBP15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 FAM26DQ5JW98 314 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 ODR4Q5SWX8 454 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 TRAF7Q6Q0C0 670 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 KCNN1Q92952 543 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 HPS3Q969F9 1004 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 MAP7D2Q96T17 732 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 STRA6Q9BX79 667 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 ZHX3Q9H4I2 956 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 CDHR5Q9HBB8 845 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 MAN1B1Q9UKM7 699 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 NOD1Q9Y239 953 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 ATP11BQ9Y2G3 1177 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 ADGRA3Q8IWK6 1321 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 A0A087WZ62 844 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 DCDC2CA8MYV0 355 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 CAND2O75155 1236 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 CHRNA1P02708 482 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 MAPTP10636 758 aaKnown RBP15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 BMP6P22004 513 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 CDC42EP1Q00587 391 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 TMEM62Q0P6H9 643 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 IFNLR1Q8IU57 520 aaPredicted RBP15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 ZNF710Q8N1W2 664 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 GLIS3Q8NEA6 775 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 ZNF668Q96K58 619 aaPredicted RBP15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 IFT74Q96LB3 600 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 FDXACB1Q9BRP7 624 aaPredicted RBP15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 FGFBP2Q9BYJ0 223 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 ST6GALNAC4Q9H4F1 302 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 IFT122Q9HBG6 1241 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 ARHGAP28Q9P2N2 729 aa15.34■□□□□ 0.05
PHACTR4-203ENST00000463428 PPP1R37O75864 691 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 SRGAP2CP0DJJ0 459 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 CKBP12277 381 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 NMT1P30419 496 aaKnown RBP15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 THPOP40225 353 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 PTENP60484 403 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 MRPS6P82932 125 aaKnown RBP15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 STK4Q13043 487 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 PSMD2Q13200 908 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 DMP1Q13316 513 aaPredicted RBP15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 MORC3Q14149 939 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 PPP2R5AQ15172 486 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 KIZQ2M2Z5 673 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 FAM26FQ5R3K3 315 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 CDCA2Q69YH5 1023 aaPredicted RBP15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 ZNF720Q7Z2F6 126 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 RSPH3Q86UC2 560 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 ZNF410Q86VK4 478 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 RNF149Q8NC42 400 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 KIAA0895Q8NCT3 520 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 TMEM161BQ8NDZ6 487 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 CAGE1Q8TC20 777 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 SYAP1Q96A49 352 aaPredicted RBP15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 NLRP4Q96MN2 994 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 KIFC3Q9BVG8 833 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 NOC4LQ9BVI4 516 aaKnown RBP15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 NFKBIZQ9BYH8 718 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 CELF4Q9BZC1 486 aaKnown RBP15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 EXOC1Q9NV70 894 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 TBC1D7Q9P0N9 293 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 KCNG1Q9UIX4 513 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 TBX21Q9UL17 535 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 CDY2AQ9Y6F7 541 aa15.33■□□□□ 0.04
PHACTR4-203ENST00000463428 SLC16A4O15374 487 aa15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 CASP5P51878 434 aa15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 CRYBB1P53674 252 aaPredicted RBP15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 TFDP1Q14186 410 aa15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 ZNF618Q5T7W0 954 aa15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 EPM2AIP1Q7L775 607 aaPredicted RBP15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 TAS1R3Q7RTX0 852 aa15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 HAUS6Q7Z4H7 955 aa15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 FAM178BQ8IXR5 827 aa15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 PPP1R16BQ96T49 567 aa15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 OSBPL7Q9BZF2 842 aa15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 KMT5AQ9NQR1 393 aa15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 RMND1Q9NWS8 449 aa15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 TRPV2Q9Y5S1 764 aa15.32■□□□□ 0.04
PHACTR4-203ENST00000463428 LRRIQ4A6NIV6 560 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 CCDC169A6NNP5 214 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 RBAK-RBAKDNI3L0D1 243 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 BIN1O00499 593 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 PITPNM1O00562 1244 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 CLTBP09497 229 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 MYBP10242 640 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 SMTNP53814 917 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 GTF2BQ00403 316 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 ZC2HC1CQ53FD0 456 aaPredicted RBP15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 ZNF658Q5TYW1 1059 aaPredicted RBP15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 ISM2Q6H9L7 571 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 TRIML1Q8N9V2 468 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 ZNF507Q8TCN5 953 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 TMEM40Q8WWA1 233 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms