RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 SMYD4Q8IYR2 804 aaPredicted RBP15.85■□□□□ 0.13
COL6A1-202ENST00000463060 TMEM161BQ8NDZ6 487 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 ZNF507Q8TCN5 953 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 PSPC1Q8WXF1 523 aaKnown RBP15.85■□□□□ 0.13
COL6A1-202ENST00000463060 ZHX3Q9H4I2 956 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 TBC1D7Q9P0N9 293 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 KCNG1Q9UIX4 513 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 ADGRA3Q8IWK6 1321 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 BRCA2P51587 3418 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 DNAH12Q6ZR08 3092 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 A0A0U1RQG5 324 aaPredicted RBP15.84■□□□□ 0.13
COL6A1-202ENST00000463060 ARVCFO00192 962 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 CYP2C9P11712 490 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 TMOD1P28289 359 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 GTF2BQ00403 316 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 CAPSQ13938 189 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 C11orf57Q6ZUT1 292 aaPredicted RBP15.84■□□□□ 0.13
COL6A1-202ENST00000463060 HAUS6Q7Z4H7 955 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 GAS2L3Q86XJ1 694 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 IFNLR1Q8IU57 520 aaPredicted RBP15.84■□□□□ 0.13
COL6A1-202ENST00000463060 KSR1Q8IVT5 923 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 FAM178BQ8IXR5 827 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 GUF1Q8N442 669 aaKnown RBP15.84■□□□□ 0.13
COL6A1-202ENST00000463060 METTL13Q8N6R0 699 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 SCFD1Q8WVM8 642 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 ABHD8Q96I13 439 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 MRPL44Q9H9J2 332 aaKnown RBP15.84■□□□□ 0.13
COL6A1-202ENST00000463060 STARD7Q9NQZ5 370 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 ARHGAP28Q9P2N2 729 aa15.84■□□□□ 0.13
COL6A1-202ENST00000463060 EIF3DO15371 548 aaKnown RBP eCLIP15.83■□□□□ 0.12
COL6A1-202ENST00000463060 MYBP10242 640 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 PPP2R5AQ15172 486 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 BMT2Q1RMZ1 405 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 TRIM71Q2Q1W2 868 aaKnown RBP15.83■□□□□ 0.12
COL6A1-202ENST00000463060 ANO6Q4KMQ2 910 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 CDCA2Q69YH5 1023 aaPredicted RBP15.83■□□□□ 0.12
COL6A1-202ENST00000463060 TAS1R3Q7RTX0 852 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 NME8Q8N427 588 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 SLC17A8Q8NDX2 589 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 WNT8BQ93098 351 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 VTI1AQ96AJ9 217 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 IFT74Q96LB3 600 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 NFKBIZQ9BYH8 718 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 DNAJC25Q9H1X3 360 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 ADAMTS10Q9H324 1103 aa15.83■□□□□ 0.12
COL6A1-202ENST00000463060 KIAA0100Q14667 2235 aaKnown RBP15.82■□□□□ 0.12
COL6A1-202ENST00000463060 SLC16A4O15374 487 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 VTNP04004 478 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 SCP2P22307 547 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 ERCC5P28715 1186 aaPredicted RBP15.82■□□□□ 0.12
COL6A1-202ENST00000463060 PPP1R2P41236 205 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 SMTNP53814 917 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 CDC42EP1Q00587 391 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 DMP1Q13316 513 aaPredicted RBP15.82■□□□□ 0.12
COL6A1-202ENST00000463060 ZC2HC1CQ53FD0 456 aaPredicted RBP15.82■□□□□ 0.12
COL6A1-202ENST00000463060 FAM47CQ5HY64 1035 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 C1orf53Q5VUE5 145 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 TAF2Q6P1X5 1199 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 DHX38Q92620 1227 aaKnown RBP15.82■□□□□ 0.12
COL6A1-202ENST00000463060 BPIFA3Q9BQP9 254 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 KCTD10Q9H3F6 313 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 TSPY26PQ9H489 355 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 IFT122Q9HBG6 1241 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 KMT5AQ9NQR1 393 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 MAPK8IP1Q9UQF2 711 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 PCDHB13Q9Y5F0 798 aa15.82■□□□□ 0.12
COL6A1-202ENST00000463060 CCDC169A6NNP5 214 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 GPR32O75388 356 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 PRPF6O94906 941 aaKnown RBP15.81■□□□□ 0.12
COL6A1-202ENST00000463060 CAVIN2O95810 425 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 CD4P01730 458 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 GPC3P51654 580 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 PTENP60484 403 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 KCNA1Q09470 495 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 PTK7Q13308 1070 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 ALCAMQ13740 583 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 SNX17Q15036 470 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 IQCB1Q15051 598 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 PTGISQ16647 500 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 CENPPQ6IPU0 288 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 FOXR2Q6PJQ5 311 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 SLC39A5Q6ZMH5 540 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 UBE2Q1Q7Z7E8 422 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 RHPN2Q8IUC4 686 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 MYOCDQ8IZQ8 938 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 ZNF710Q8N1W2 664 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 DIS3LQ8TF46 1054 aaKnown RBP15.81■□□□□ 0.12
COL6A1-202ENST00000463060 DNAJB3Q8WWF6 145 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 HVCN1Q96D96 273 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 DHTKD1Q96HY7 919 aaPredicted RBP15.81■□□□□ 0.12
COL6A1-202ENST00000463060 KIFC3Q9BVG8 833 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 TMEM106CQ9BVX2 250 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 SENP6Q9GZR1 1112 aaPredicted RBP15.81■□□□□ 0.12
COL6A1-202ENST00000463060 CCDC113Q9H0I3 377 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 SEMA6BQ9H3T3 888 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 TMEM134Q9H6X4 195 aa15.81■□□□□ 0.12
COL6A1-202ENST00000463060 TRMT13Q9NUP7 481 aaKnown RBP15.81■□□□□ 0.12
COL6A1-202ENST00000463060 UBE4BO95155 1302 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 A0A087WZ62 844 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 K7ENM7 598 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms