RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 DEPTORQ8TB45 409 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 HAS1Q92839 578 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 TNFRSF25Q93038 417 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 TMEM143Q96AN5 459 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 ZNF668Q96K58 619 aaPredicted RBP9.95□□□□□ -0.82
DDX39B-216ENST00000462421 SH2D3AQ9BRG2 576 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 FDXACB1Q9BRP7 624 aaPredicted RBP9.95□□□□□ -0.82
DDX39B-216ENST00000462421 C17orf80Q9BSJ5 609 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 TMEM117Q9H0C3 514 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 NT5C3AQ9H0P0 336 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 C2orf40Q9H1Z8 148 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 NSUN3Q9H649 340 aaKnown RBP9.95□□□□□ -0.82
DDX39B-216ENST00000462421 RGL1Q9NZL6 768 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 KCNG1Q9UIX4 513 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 DNM3Q9UQ16 869 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 PHLPP2Q6ZVD8 1323 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 DOCK5Q9H7D0 1870 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 LRRIQ4A6NIV6 560 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 ZBTB42B2RXF5 422 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 H3BNC9 293 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 RFXAPO00287 272 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 CSPG5O95196 566 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 AXLP30530 894 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 BMPR1AP36894 532 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 ALDH7A1P49419 539 aaKnown RBP9.94□□□□□ -0.82
DDX39B-216ENST00000462421 NPEPPSP55786 919 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 LAMTOR4Q0VGL1 99 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 TARBP2Q15633 366 aaKnown RBP9.94□□□□□ -0.82
DDX39B-216ENST00000462421 EARS2Q5JPH6 523 aaKnown RBP9.94□□□□□ -0.82
DDX39B-216ENST00000462421 NOTUMQ6P988 496 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 PRPF31Q8WWY3 499 aaKnown RBP9.94□□□□□ -0.82
DDX39B-216ENST00000462421 VWCEQ96DN2 955 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 CCDC51Q96ER9 411 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 CALML4Q96GE6 196 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 ADPGKQ9BRR6 497 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 POLR3CQ9BUI4 534 aaPredicted RBP9.94□□□□□ -0.82
DDX39B-216ENST00000462421 UBN1Q9NPG3 1134 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 DAXXQ9UER7 740 aaPredicted RBP9.94□□□□□ -0.82
DDX39B-216ENST00000462421 STK39Q9UEW8 545 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 GTF3C3Q9Y5Q9 886 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 MTCH2Q9Y6C9 303 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 SCN5AQ14524 2016 aa9.94□□□□□ -0.82
DDX39B-216ENST00000462421 TMEM150BA6NC51 233 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 SLITRK3O94933 977 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 LYPLA2O95372 231 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 SSBP05455 408 aaKnown RBP eCLIP9.93□□□□□ -0.82
DDX39B-216ENST00000462421 KRT18P05783 430 aaKnown RBP9.93□□□□□ -0.82
DDX39B-216ENST00000462421 PDIA4P13667 645 aaKnown RBP9.93□□□□□ -0.82
DDX39B-216ENST00000462421 LIG1P18858 919 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 POU3F3P20264 500 aaPredicted RBP9.93□□□□□ -0.82
DDX39B-216ENST00000462421 U2AF2P26368 475 aaKnown RBP eCLIP9.93□□□□□ -0.82
DDX39B-216ENST00000462421 RPA1P27694 616 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 PRPHP41219 470 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 FXR2P51116 673 aaKnown RBP eCLIP9.93□□□□□ -0.82
DDX39B-216ENST00000462421 UBE3AQ05086 875 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 PTGDRQ13258 359 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 PDIA5Q14554 519 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 TCTN1Q2MV58 587 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 PUS10Q3MIT2 529 aaKnown RBP9.93□□□□□ -0.82
DDX39B-216ENST00000462421 ELMSAN1Q6PJG2 1045 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 B3GNT9Q6UX72 402 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 MAEAQ7L5Y9 396 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 ECHDC2Q86YB7 292 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 PIGOQ8TEQ8 1089 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 KIFAP3Q92845 792 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 P2RX5Q93086 422 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 ZNF558Q96NG5 402 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 MTMR9Q96QG7 549 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 POLR3FQ9H1D9 316 aaPredicted RBP9.93□□□□□ -0.82
DDX39B-216ENST00000462421 ADAMTS10Q9H324 1103 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 DHX33Q9H6R0 707 aaKnown RBP9.93□□□□□ -0.82
DDX39B-216ENST00000462421 ENTPD7Q9NQZ7 604 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 KANSL3Q9P2N6 904 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 DBR1Q9UK59 544 aaKnown RBP9.93□□□□□ -0.82
DDX39B-216ENST00000462421 INPP5FQ9Y2H2 1132 aa9.93□□□□□ -0.82
DDX39B-216ENST00000462421 LAMA3Q16787 3333 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 CNTNAP2Q9UHC6 1331 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 IGKV6-21A0A0C4DH24 114 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 A0A0U1RQF3 1178 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 C9IYK1 514 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 K7ELQ4 463 aaPredicted RBP9.92□□□□□ -0.82
DDX39B-216ENST00000462421 FGFR4P22455 802 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 UBA7P41226 1012 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 RARRES1P49788 294 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 DMP1Q13316 513 aaPredicted RBP9.92□□□□□ -0.82
DDX39B-216ENST00000462421 ADGRE1Q14246 886 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 PDE12Q6L8Q7 609 aaKnown RBP9.92□□□□□ -0.82
DDX39B-216ENST00000462421 FERMT3Q86UX7 667 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 TMEM40Q8WWA1 233 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 TMEM169Q96HH4 297 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 DRC1Q96MC2 740 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 RPS6KC1Q96S38 1066 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 KIF2CQ99661 725 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 BACH2Q9BYV9 841 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 CDHR5Q9HBB8 845 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 AGPAT5Q9NUQ2 364 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 FAM105AQ9NUU6 356 aa9.92□□□□□ -0.82
DDX39B-216ENST00000462421 PRMT7Q9NVM4 692 aaPredicted RBP9.92□□□□□ -0.82
DDX39B-216ENST00000462421 MRPL42Q9Y6G3 142 aaKnown RBP9.92□□□□□ -0.82
DDX39B-216ENST00000462421 TRIP12Q14669 1992 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms