RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 NOGQ13253 232 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 MXD4Q14582 209 aaPredicted RBP4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 FAM47CQ5HY64 1035 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 IER5Q5VY09 327 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 FOXR2Q6PJQ5 311 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ABHD15Q6UXT9 468 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 TRIM50Q86XT4 487 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 GPIHBP1Q8IV16 184 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 KSR1Q8IVT5 923 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ZNF507Q8TCN5 953 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 AFG1LQ8WV93 481 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 TINF2Q9BSI4 451 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 DESI2Q9BSY9 194 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 KIFC3Q9BVG8 833 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 KIAA1586Q9HCI6 787 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 LZTFL1Q9NQ48 299 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 MORF4L1Q9UBU8 362 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 DNAI1Q9UI46 699 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 DDX41Q9UJV9 622 aaKnown RBP4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 TRAF3IP3Q9Y228 551 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 NOD1Q9Y239 953 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 PPME1Q9Y570 386 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 TTC26A0AVF1 554 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 TMEM88BA6NKF7 163 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 NKRFO15226 690 aaKnown RBP eCLIP4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ERLIN2O94905 339 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 MYL3P08590 195 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 MAP2K5Q13163 448 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 DGKDQ16760 1214 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ANO5Q75V66 913 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 RASAL3Q86YV0 1011 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 RHPN2Q8IUC4 686 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 RNF149Q8NC42 400 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 CAGE1Q8TC20 777 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 SPIRE2Q8WWL2 714 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ALS2CR12Q96Q35 445 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ADPGKQ9BRR6 497 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 MSTO1Q9BUK6 570 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 MRPL4Q9BYD3 311 aaKnown RBP4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 EDEM3Q9BZQ6 932 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 FAM49AQ9H0Q0 323 aaPredicted RBP4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 KCNF1Q9H3M0 494 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ABHD10Q9NUJ1 306 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 SUCLA2Q9P2R7 463 aaPredicted RBP4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 TBX20Q9UMR3 447 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 PPP2R2CQ9Y2T4 447 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 PAXBP1Q9Y5B6 917 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 SIPA1L1O43166 1804 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 FRMD3A2A2Y4 597 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 LRRC10BA6NIK2 292 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 M0QZ92 97 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 KIAA0391O15091 583 aaKnown RBP4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ZNF862O60290 1169 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ZEB2O60315 1214 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 TRIM49P0CI25 452 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 TRIM49CP0CI26 452 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 IBSPP21815 317 aaPredicted RBP4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 HOXD10P28358 340 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ADCYAP1R1P41586 468 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 STAT1P42224 750 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 NAMPTP43490 491 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 FXR1P51114 621 aaKnown RBP eCLIP4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 VAMP7P51809 220 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ACVR2BQ13705 512 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 MYBPC2Q14324 1141 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ARHGAP44Q17R89 818 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 BMT2Q1RMZ1 405 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 CCDC122Q5T0U0 273 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 IQSEC1Q6DN90 963 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 LRRC55Q6ZSA7 311 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 LRRC71Q8N4P6 559 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 NLRP7Q8WX94 980 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 COPS5Q92905 334 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 SAAL1Q96ER3 474 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 MED15Q96RN5 788 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ERGIC2Q96RQ1 377 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 TMX1Q9H3N1 280 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 ZCCHC17Q9NP64 241 aaKnown RBP4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 HSPBP1Q9NZL4 362 aa4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 WRAP73Q9P2S5 460 aaPredicted RBP4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 EPN1Q9Y6I3 576 aaPredicted RBP4.49□□□□□ -1.69
ATP13A3-206ENST00000461660 GREB1LQ9C091 1923 aaPredicted RBP4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 SOWAHDA6NJG2 315 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 CLDN3O15551 220 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 CNMDO75829 334 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 AKAP3O75969 853 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 LDHAP00338 332 aaKnown RBP4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 GYPCP04921 128 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 EDNRBP24530 442 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 MAGEA1P43355 309 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 ZNF131P52739 623 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 CCZ1BP86790 482 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 CCZ1P86791 482 aaPredicted RBP4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 TRPC3Q13507 836 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 ZNF484Q5JVG2 852 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 CCDC70Q6NSX1 233 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 SYT10Q6XYQ8 523 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 IRF2BP1Q8IU81 584 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 TRIM59Q8IWR1 403 aa4.48□□□□□ -1.69
ATP13A3-206ENST00000461660 TC2NQ8N9U0 490 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms