RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 IFT74Q96LB3 600 aa8.41□□□□□ -1.06
ABCA4-202ENST00000460514 C7orf25Q9BPX7 421 aa8.41□□□□□ -1.06
ABCA4-202ENST00000460514 TRIM9Q9C026 710 aa8.41□□□□□ -1.06
ABCA4-202ENST00000460514 CLSTN2Q9H4D0 955 aa8.41□□□□□ -1.06
ABCA4-202ENST00000460514 SUGCTQ9HAC7 445 aa8.41□□□□□ -1.06
ABCA4-202ENST00000460514 RMND1Q9NWS8 449 aa8.41□□□□□ -1.06
ABCA4-202ENST00000460514 LARSQ9P2J5 1176 aaKnown RBP8.41□□□□□ -1.06
ABCA4-202ENST00000460514 SEL1LQ9UBV2 794 aa8.41□□□□□ -1.06
ABCA4-202ENST00000460514 PCDHA2Q9Y5H9 948 aa8.41□□□□□ -1.06
ABCA4-202ENST00000460514 COL4A3BPQ9Y5P4 624 aa8.41□□□□□ -1.06
ABCA4-202ENST00000460514 KIAA0100Q14667 2235 aaKnown RBP8.41□□□□□ -1.06
ABCA4-202ENST00000460514 ARID2Q68CP9 1835 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 PHLPP2Q6ZVD8 1323 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 A0A087WWV3 80 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 IGKV6-21A0A0C4DH24 114 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 PVALEFA0A1B0GWK0 134 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 TMEM150BA6NC51 233 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 MYMKA6NI61 221 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 DCDC2CA8MYV0 355 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 ZBTB42B2RXF5 422 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 H0YCG3 227 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 M0QZ92 97 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 TRAK2O60296 914 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 CAND2O75155 1236 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 LETM1O95202 739 aaPredicted RBP8.4□□□□□ -1.06
ABCA4-202ENST00000460514 CYP2C9P11712 490 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 COL6A1P12109 1028 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 IDEP14735 1019 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 SMTNP53814 917 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 RTP1P59025 263 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 PTK7Q13308 1070 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 DMP1Q13316 513 aaPredicted RBP8.4□□□□□ -1.06
ABCA4-202ENST00000460514 TFDP1Q14186 410 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 FAM102BQ5T8I3 360 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 COL13A1Q5TAT6 717 aaPredicted RBP8.4□□□□□ -1.06
ABCA4-202ENST00000460514 SLC39A5Q6ZMH5 540 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 STXBP4Q6ZWJ1 553 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 DYMQ7RTS9 669 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 SH3RF1Q7Z6J0 888 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 TNS4Q8IZW8 715 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 TRAPPC12Q8WVT3 735 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 SMARCE1Q969G3 411 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 PAWRQ96IZ0 340 aaKnown RBP8.4□□□□□ -1.06
ABCA4-202ENST00000460514 TOX2Q96NM4 488 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 SH2D3AQ9BRG2 576 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 RUSC1Q9BVN2 902 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 ZHX3Q9H4I2 956 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 PARVGQ9HBI0 331 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 AKT3Q9Y243 479 aa8.4□□□□□ -1.06
ABCA4-202ENST00000460514 GRIN2DO15399 1336 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 TREHO43280 583 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 HIP1RO75146 1068 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 KIF20AO95235 890 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 CDK7P50613 346 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 ADAM17P78536 824 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 PSMD2Q13200 908 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 BFSP2Q13515 415 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 ALCAMQ13740 583 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 GIT2Q14161 759 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 SNX17Q15036 470 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 ARSHQ5FYA8 562 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 MARCH8Q5T0T0 291 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 GDF6Q6KF10 455 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-202ENST00000460514 UNC13DQ70J99 1090 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 MAEAQ7L5Y9 396 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 ANKRD33Q7Z3H0 272 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 RPAINQ86UA6 219 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 SERINC5Q86VE9 423 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 ZNF410Q86VK4 478 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 MYCT1Q8N699 235 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 ZNF454Q8N9F8 522 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 CAGE1Q8TC20 777 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 LRRC15Q8TF66 581 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 STAMQ92783 540 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 SCLT1Q96NL6 688 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 GSDMAQ96QA5 445 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 CEP89Q96ST8 783 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 REEP2Q9BRK0 252 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 ANP32EQ9BTT0 268 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 POLR3FQ9H1D9 316 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-202ENST00000460514 BLZF1Q9H2G9 400 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 PDLIM7Q9NR12 457 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 EXOC1Q9NV70 894 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 PANK4Q9NVE7 773 aa8.39□□□□□ -1.07
ABCA4-202ENST00000460514 SUCLA2Q9P2R7 463 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-202ENST00000460514 CCDC85CA6NKD9 419 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 B4GALT4O60513 344 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 PQBP1O60828 265 aaKnown RBP8.38□□□□□ -1.07
ABCA4-202ENST00000460514 RPN1P04843 607 aaKnown RBP8.38□□□□□ -1.07
ABCA4-202ENST00000460514 MAPTP10636 758 aaKnown RBP8.38□□□□□ -1.07
ABCA4-202ENST00000460514 PLS3P13797 630 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 EN2P19622 333 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-202ENST00000460514 ARL2P36404 184 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 PPP1R2P41236 205 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 NAMPTP43490 491 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 PHKA2P46019 1235 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 CLCN3P51790 818 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 ZNF131P52739 623 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 MDM2Q00987 491 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-202ENST00000460514 POU5F1BQ06416 359 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms