RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 RTP5Q14D33 572 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 ANO4Q32M45 955 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 IFIT1BQ5T764 474 aaKnown RBP7.11□□□□□ -1.27
CCDC50-203ENST00000460064 GRAMD4Q6IC98 578 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 GAREM2Q75VX8 874 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 EPM2AIP1Q7L775 607 aaPredicted RBP7.11□□□□□ -1.27
CCDC50-203ENST00000460064 OTOP2Q7RTS6 562 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 BMP8AQ7Z5Y6 402 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 THEMISQ8N1K5 641 aaPredicted RBP7.11□□□□□ -1.27
CCDC50-203ENST00000460064 LINC00482Q8N8I6 264 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 AIFM3Q96NN9 605 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 ANLNQ9NQW6 1124 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 TUBD1Q9UJT1 453 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 CCDC194A0A1B0GVG4 234 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 VSTM5A8MXK1 200 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 H0Y858 1186 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 AP1G1O43747 822 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 NRP2O60462 931 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 MAP4K4O95819 1239 aaPredicted RBP7.1□□□□□ -1.27
CCDC50-203ENST00000460064 KRT18P05783 430 aaKnown RBP7.1□□□□□ -1.27
CCDC50-203ENST00000460064 SLC16A1P53985 500 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 DLG4P78352 724 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 UAP1L1Q3KQV9 507 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 ARHGAP29Q52LW3 1261 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 SLC4A10Q6U841 1118 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 Q8N3U1 123 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 DYDC2Q96IM9 177 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 SLC52A1Q9NWF4 448 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 OBP2AQ9NY56 170 aa7.1□□□□□ -1.27
CCDC50-203ENST00000460064 SAE1Q9UBE0 346 aaPredicted RBP7.1□□□□□ -1.27
CCDC50-203ENST00000460064 OFD1O75665 1012 aa7.09□□□□□ -1.27
CCDC50-203ENST00000460064 POU2F2P09086 479 aa7.09□□□□□ -1.27
CCDC50-203ENST00000460064 GSPT1P15170 499 aaKnown RBP7.09□□□□□ -1.27
CCDC50-203ENST00000460064 MLLT6P55198 1093 aaPredicted RBP7.09□□□□□ -1.27
CCDC50-203ENST00000460064 NRG3P56975 720 aa7.09□□□□□ -1.27
CCDC50-203ENST00000460064 ADRM1Q16186 407 aa7.09□□□□□ -1.27
CCDC50-203ENST00000460064 CCDC178Q5BJE1 867 aa7.09□□□□□ -1.27
CCDC50-203ENST00000460064 TRMT10BQ6PF06 316 aaKnown RBP7.09□□□□□ -1.27
CCDC50-203ENST00000460064 CCAR1Q8IX12 1150 aaKnown RBP7.09□□□□□ -1.27
CCDC50-203ENST00000460064 OR5AN1Q8NGI8 311 aa7.09□□□□□ -1.27
CCDC50-203ENST00000460064 COA7Q96BR5 231 aa7.09□□□□□ -1.27
CCDC50-203ENST00000460064 PCGF6Q9BYE7 350 aa7.09□□□□□ -1.27
CCDC50-203ENST00000460064 NMRK2Q9NPI5 230 aa7.09□□□□□ -1.27
CCDC50-203ENST00000460064 CDC42EP3Q9UKI2 254 aa7.09□□□□□ -1.27
CCDC50-203ENST00000460064 DNM3Q9UQ16 869 aa7.09□□□□□ -1.27
CCDC50-203ENST00000460064 PMF1-BGLAPU3KQ54 211 aa7.09□□□□□ -1.27
CCDC50-203ENST00000460064 A0A0G2JNJ9 132 aa7.08□□□□□ -1.28
CCDC50-203ENST00000460064 MAFO75444 373 aaPredicted RBP7.08□□□□□ -1.28
CCDC50-203ENST00000460064 CHGBP05060 677 aa7.08□□□□□ -1.28
CCDC50-203ENST00000460064 PDCP20941 246 aa7.08□□□□□ -1.28
CCDC50-203ENST00000460064 IL13P35225 146 aa7.08□□□□□ -1.28
CCDC50-203ENST00000460064 MALLQ13021 153 aa7.08□□□□□ -1.28
CCDC50-203ENST00000460064 HLTFQ14527 1009 aaKnown RBP eCLIP7.08□□□□□ -1.28
CCDC50-203ENST00000460064 MUM1L1Q5H9M0 696 aa7.08□□□□□ -1.28
CCDC50-203ENST00000460064 LMBR1LQ6UX01 489 aa7.08□□□□□ -1.28
CCDC50-203ENST00000460064 SLC35G2Q8TBE7 412 aa7.08□□□□□ -1.28
CCDC50-203ENST00000460064 Q9UFV3 132 aa7.08□□□□□ -1.28
CCDC50-203ENST00000460064 SAP30BPQ9UHR5 308 aaKnown RBP7.08□□□□□ -1.28
CCDC50-203ENST00000460064 SERPINB13Q9UIV8 391 aa7.08□□□□□ -1.28
CCDC50-203ENST00000460064 FBXO10Q9UK96 956 aa7.08□□□□□ -1.28
CCDC50-203ENST00000460064 IRAK3Q9Y616 596 aa7.08□□□□□ -1.28
CCDC50-203ENST00000460064 A0A0A6YYK5 440 aaPredicted RBP7.07□□□□□ -1.28
CCDC50-203ENST00000460064 ETV2O00321 342 aaPredicted RBP7.07□□□□□ -1.28
CCDC50-203ENST00000460064 ERC2O15083 957 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 CTNND1O60716 968 aaKnown RBP7.07□□□□□ -1.28
CCDC50-203ENST00000460064 KNG1P01042 644 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 MGAT5Q09328 741 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 BTNL9Q6UXG8 535 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 CATIPQ7Z7H3 387 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 DGKHQ86XP1 1220 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 GLB1L2Q8IW92 636 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 TMEFF1Q8IYR6 380 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 NRG4Q8WWG1 115 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 SIGLEC10Q96LC7 697 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 SOX7Q9BT81 388 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 ADI1Q9BV57 179 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 GREM2Q9H772 168 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 PRDM11Q9NQV5 511 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.07□□□□□ -1.28
CCDC50-203ENST00000460064 DNAI1Q9UI46 699 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 INTUQ9ULD6 942 aa7.07□□□□□ -1.28
CCDC50-203ENST00000460064 PLA2G1BP04054 148 aaKnown RBP7.06□□□□□ -1.28
CCDC50-203ENST00000460064 KCNQ1P51787 676 aa7.06□□□□□ -1.28
CCDC50-203ENST00000460064 CD69Q07108 199 aa7.06□□□□□ -1.28
CCDC50-203ENST00000460064 ZNF267Q14586 743 aaPredicted RBP7.06□□□□□ -1.28
CCDC50-203ENST00000460064 MAP9Q49MG5 647 aa7.06□□□□□ -1.28
CCDC50-203ENST00000460064 TMEM200BQ69YZ2 307 aa7.06□□□□□ -1.28
CCDC50-203ENST00000460064 CCSAPQ6IQ19 270 aaPredicted RBP7.06□□□□□ -1.28
CCDC50-203ENST00000460064 KSR2Q6VAB6 950 aa7.06□□□□□ -1.28
CCDC50-203ENST00000460064 USP45Q70EL2 814 aa7.06□□□□□ -1.28
CCDC50-203ENST00000460064 BCL6BQ8N143 479 aaPredicted RBP7.06□□□□□ -1.28
CCDC50-203ENST00000460064 GLB1L3Q8NCI6 653 aaPredicted RBP7.06□□□□□ -1.28
CCDC50-203ENST00000460064 FNIP1Q8TF40 1166 aa7.06□□□□□ -1.28
CCDC50-203ENST00000460064 HPS3Q969F9 1004 aa7.06□□□□□ -1.28
CCDC50-203ENST00000460064 FDXACB1Q9BRP7 624 aaPredicted RBP7.06□□□□□ -1.28
CCDC50-203ENST00000460064 GTPBP4Q9BZE4 634 aaKnown RBP7.06□□□□□ -1.28
CCDC50-203ENST00000460064 HAPLN2Q9GZV7 340 aa7.06□□□□□ -1.28
CCDC50-203ENST00000460064 POLR3BQ9NW08 1133 aaPredicted RBP7.06□□□□□ -1.28
CCDC50-203ENST00000460064 SPATA6Q9NWH7 488 aaPredicted RBP7.06□□□□□ -1.28
CCDC50-203ENST00000460064 LIMCH1Q9UPQ0 1083 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms