RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 PLEKHO2Q8TD55 490 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 ZNF296Q8WUU4 475 aaPredicted RBP9.64□□□□□ -0.87
RIF1-208ENST00000457745 GLG1Q92896 1179 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 CNOT6LQ96LI5 555 aaKnown RBP9.64□□□□□ -0.87
RIF1-208ENST00000457745 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 KRTAP3-2Q9BYR7 98 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 LRRC27Q9C0I9 530 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 HAPLN2Q9GZV7 340 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 CRISPLD2Q9H0B8 497 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 ATP6V0A4Q9HBG4 840 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 DACH1Q9UI36 760 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 COL4A3BPQ9Y5P4 624 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 SCN10AQ9Y5Y9 1956 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 A0A1B0GTH6 734 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 A6NJR5 290 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 MAFO75444 373 aaPredicted RBP9.63□□□□□ -0.87
RIF1-208ENST00000457745 PGK1P00558 417 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 XRCC5P13010 732 aaKnown RBP9.63□□□□□ -0.87
RIF1-208ENST00000457745 INSRRP14616 1297 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 MAP2K2P36507 400 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 WNT7BP56706 349 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 IGBP1P78318 339 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 APBA1Q02410 837 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 NR1I3Q14994 352 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 KNOP1Q1ED39 458 aaKnown RBP9.63□□□□□ -0.87
RIF1-208ENST00000457745 TCP11X2Q5H9J9 407 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 CT47A1Q5JQC4 288 aaPredicted RBP9.63□□□□□ -0.87
RIF1-208ENST00000457745 FAM160B1Q5W0V3 765 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 SCARA3Q6AZY7 606 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 HAUS6Q7Z4H7 955 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 FAM178BQ8IXR5 827 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 TMEM130Q8N3G9 435 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 CSGALNACT2Q8N6G5 542 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 MRFAP1L1Q96HT8 127 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 PPP1R16BQ96T49 567 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 MPHOSPH6Q99547 160 aaKnown RBP9.63□□□□□ -0.87
RIF1-208ENST00000457745 CBWD1Q9BRT8 395 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 VPS16Q9H269 839 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 KCND2Q9NZV8 630 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 SRRDQ9UH36 339 aa9.63□□□□□ -0.87
RIF1-208ENST00000457745 HAS3O00219 553 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 ADAMTS4O75173 837 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 DGAT1O75907 488 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 AKAP3O75969 853 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 ADRB2P07550 413 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 MAPTP10636 758 aaKnown RBP9.62□□□□□ -0.87
RIF1-208ENST00000457745 CDC25BP30305 580 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 ADSSP30520 456 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 POLGP54098 1239 aaPredicted RBP9.62□□□□□ -0.87
RIF1-208ENST00000457745 LRMPQ12912 555 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 ZBTB41Q5SVQ8 909 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 DPY19L2P1Q6NXN4 242 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 ARMCX5Q6P1M9 558 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 RUFY4Q6ZNE9 571 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 VSTM4Q8IW00 320 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 WNT8BQ93098 351 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 CCDC47Q96A33 483 aaKnown RBP9.62□□□□□ -0.87
RIF1-208ENST00000457745 BORCS6Q96GS4 357 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 SMARCAD1Q9H4L7 1026 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 THAP9Q9H5L6 903 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 MINDY3Q9H8M7 445 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 AGPAT3Q9NRZ7 376 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 ARHGAP28Q9P2N2 729 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 TRAF3IP3Q9Y228 551 aa9.62□□□□□ -0.87
RIF1-208ENST00000457745 DENND3A2RUS2 1198 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 CCDC169A6NNP5 214 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 H3BRB1 525 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 EPHB6O15197 1021 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 EIF3DO15371 548 aaKnown RBP eCLIP9.61□□□□□ -0.87
RIF1-208ENST00000457745 LRRN2O75325 713 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 CSDE1O75534 798 aaKnown RBP9.61□□□□□ -0.87
RIF1-208ENST00000457745 F2P00734 622 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 NR3C1P04150 777 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 MYL3P08590 195 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 UBASH3AP57075 661 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 CHMP4BP1P59074 171 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 GTF2BQ00403 316 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 TBX2Q13207 712 aaPredicted RBP9.61□□□□□ -0.87
RIF1-208ENST00000457745 STIM1Q13586 685 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 C1orf220Q5T0J3 134 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 MAP3K21Q5TCX8 1036 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 OTUD6AQ7L8S5 288 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 CCDC186Q7Z3E2 898 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 TMC6Q7Z403 805 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 C17orf53Q8N3J3 647 aaPredicted RBP9.61□□□□□ -0.87
RIF1-208ENST00000457745 CACTINQ8WUQ7 758 aaKnown RBP9.61□□□□□ -0.87
RIF1-208ENST00000457745 SPIRE2Q8WWL2 714 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 DDX27Q96GQ7 796 aaKnown RBP9.61□□□□□ -0.87
RIF1-208ENST00000457745 ZBTB45Q96K62 511 aaPredicted RBP9.61□□□□□ -0.87
RIF1-208ENST00000457745 CTAGE1Q96RT6 745 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 OSBPL7Q9BZF2 842 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 CCDC113Q9H0I3 377 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 UPF3AQ9H1J1 476 aaKnown RBP9.61□□□□□ -0.87
RIF1-208ENST00000457745 ST6GALNAC4Q9H4F1 302 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 PCIF1Q9H4Z3 704 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 TUT1Q9H6E5 874 aaKnown RBP9.61□□□□□ -0.87
RIF1-208ENST00000457745 AZI2Q9H6S1 392 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 SUGCTQ9HAC7 445 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 TYW1Q9NV66 732 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms