RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 KIZQ2M2Z5 673 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 C1orf186Q6ZWK4 172 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 KSR1Q8IVT5 923 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 DBF4BQ8NFT6 615 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 LEO1Q8WVC0 666 aaPredicted RBP11.18□□□□□ -0.62
ATG4A-206ENST00000457035 TMEM40Q8WWA1 233 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 PRPF31Q8WWY3 499 aaKnown RBP11.18□□□□□ -0.62
ATG4A-206ENST00000457035 HERVK_113Q902F9 699 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 CALML4Q96GE6 196 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 MTRQ99707 1265 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 ATP6V0A4Q9HBG4 840 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
ATG4A-206ENST00000457035 BLOC1S4Q9NUP1 217 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 GBF1Q92538 1859 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 A0A087X0B3 334 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 ARHGEF35A5YM69 484 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 M0QZ92 97 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 USO1O60763 962 aaKnown RBP11.17□□□□□ -0.62
ATG4A-206ENST00000457035 GHRP10912 638 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 PLCG1P19174 1290 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 SLC12A3P55017 1021 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 LAMTOR4Q0VGL1 99 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 NAALADL2Q58DX5 795 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 ZNF697Q5TEC3 545 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 RINT1Q6NUQ1 792 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 CNKSR3Q6P9H4 555 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 PSRC1Q6PGN9 363 aaPredicted RBP11.17□□□□□ -0.62
ATG4A-206ENST00000457035 SHC4Q6S5L8 630 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 TSHZ1Q6ZSZ6 1077 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 OTOP2Q7RTS6 562 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 RHPN2Q8IUC4 686 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
ATG4A-206ENST00000457035 USP38Q8NB14 1042 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 TCP11Q8WWU5 503 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 PSPC1Q8WXF1 523 aaKnown RBP11.17□□□□□ -0.62
ATG4A-206ENST00000457035 CDK5RAP3Q96JB5 506 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 ZNF668Q96K58 619 aaPredicted RBP11.17□□□□□ -0.62
ATG4A-206ENST00000457035 SPATA32Q96LK8 384 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 CCDC43Q96MW1 224 aaKnown RBP11.17□□□□□ -0.62
ATG4A-206ENST00000457035 PPP1R16BQ96T49 567 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 OSMRQ99650 979 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 PANK2Q9BZ23 570 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 IFT122Q9HBG6 1241 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 POLD4Q9HCU8 107 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 GPRC5CQ9NQ84 441 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 CXXC1Q9P0U4 656 aaPredicted RBP11.17□□□□□ -0.62
ATG4A-206ENST00000457035 GINS2Q9Y248 185 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 NOC2LQ9Y3T9 749 aaKnown RBP11.17□□□□□ -0.62
ATG4A-206ENST00000457035 COL4A3BPQ9Y5P4 624 aa11.17□□□□□ -0.62
ATG4A-206ENST00000457035 A0A087WZ62 844 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 PLA2G4BP0C869 781 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 DARSP14868 501 aaKnown RBP11.16□□□□□ -0.62
ATG4A-206ENST00000457035 NCLP19338 710 aaKnown RBP11.16□□□□□ -0.62
ATG4A-206ENST00000457035 GLRA2P23416 452 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 EIF4BP23588 611 aaKnown RBP11.16□□□□□ -0.62
ATG4A-206ENST00000457035 CD52P31358 61 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 ME1P48163 572 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 POU5F1BQ06416 359 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 MXD4Q14582 209 aaPredicted RBP11.16□□□□□ -0.62
ATG4A-206ENST00000457035 ARSHQ5FYA8 562 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 ADALQ6DHV7 355 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 MAEAQ7L5Y9 396 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 RTN4RL1Q86UN2 441 aaPredicted RBP11.16□□□□□ -0.62
ATG4A-206ENST00000457035 ZNF410Q86VK4 478 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 MCPH1Q8NEM0 835 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 ASAP3Q8TDY4 903 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 SEPT8Q92599 483 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 RAD54LQ92698 747 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 GUCD1Q96NT3 240 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 IPO9Q96P70 1041 aaKnown RBP11.16□□□□□ -0.62
ATG4A-206ENST00000457035 FDXACB1Q9BRP7 624 aaPredicted RBP11.16□□□□□ -0.62
ATG4A-206ENST00000457035 RUSC1Q9BVN2 902 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 IFIH1Q9BYX4 1025 aaKnown RBP11.16□□□□□ -0.62
ATG4A-206ENST00000457035 SCAND2PQ9GZW5 306 aaPredicted RBP11.16□□□□□ -0.62
ATG4A-206ENST00000457035 CHMP5Q9NZZ3 219 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 CCDC39Q9UFE4 941 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 PADI3Q9ULW8 664 aa11.16□□□□□ -0.62
ATG4A-206ENST00000457035 ABHD14A-ACY1A0A1B0GW23 586 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 ENPP3O14638 875 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 CSDE1O75534 798 aaKnown RBP11.15□□□□□ -0.62
ATG4A-206ENST00000457035 RPS6KA5O75582 802 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 BAIAP3O94812 1187 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 SRGAP2CP0DJJ0 459 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 ACTN1P12814 892 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 IKBKEQ14164 716 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 MCM6Q14566 821 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 RRAGBQ5VZM2 374 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 RESP18Q5W5W9 173 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 FAM228AQ86W67 206 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 DAW1Q8N136 415 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 NLRP7Q8WX94 980 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 APBB2Q92870 758 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 RNPC3Q96LT9 517 aaKnown RBP11.15□□□□□ -0.62
ATG4A-206ENST00000457035 GCOM2Q9BZD3 368 aaPredicted RBP11.15□□□□□ -0.62
ATG4A-206ENST00000457035 POLR3FQ9H1D9 316 aaPredicted RBP11.15□□□□□ -0.62
ATG4A-206ENST00000457035 TMX1Q9H3N1 280 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 MINDY3Q9H8M7 445 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 GDPD2Q9HCC8 539 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 ERVK-5Q9HDB9 667 aa11.15□□□□□ -0.62
ATG4A-206ENST00000457035 ST3GAL5Q9UNP4 418 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms