RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 LZTS2Q9BRK4 669 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 CARD9Q9H257 536 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 BCAS3Q9H6U6 928 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 ETNK1Q9HBU6 452 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 RXFP1Q9HBX9 757 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 GCNT4Q9P109 453 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 COG5Q9UP83 839 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 ARL2BPQ9Y2Y0 163 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 PCDHA3Q9Y5H8 950 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 FRMPD2Q68DX3 1309 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-208ENST00000456385 ANKRD33BA6NCL7 494 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 FAM187AA6NFU0 413 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 USP17L5A8MUK1 530 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 LIN7AO14910 233 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-208ENST00000456385 ACSL3O95573 720 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 PDHA1P08559 390 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 RASA1P20936 1047 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 HOXD13P35453 343 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 CCNG1P51959 295 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 EVA1CP58658 441 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 DHX34Q14147 1143 aaKnown RBP11.13□□□□□ -0.63
CLIP4-208ENST00000456385 ARSHQ5FYA8 562 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 FBXO33Q7Z6M2 555 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 PALB2Q86YC2 1186 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 ZC3H3Q8IXZ2 948 aaKnown RBP11.13□□□□□ -0.63
CLIP4-208ENST00000456385 GBP7Q8N8V2 638 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-208ENST00000456385 SLC30A5Q8TAD4 765 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 RFFLQ8WZ73 363 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 KRT35Q92764 455 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 THAP2Q9H0W7 228 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 KCNK9Q9NPC2 374 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 ETAA1Q9NY74 926 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 PRKAG3Q9UGI9 489 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 CHORDC1Q9UHD1 332 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-208ENST00000456385 PFASO15067 1338 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 MARCH6O60337 910 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 SNUPNO95149 360 aaKnown RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 KRT18P05783 430 aaKnown RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 PECAM1P16284 738 aaPredicted RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 GNAZP19086 355 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 CYP11B2P19099 503 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 DRG2P55039 364 aaKnown RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 SEPT2Q15019 361 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 EDRF1Q3B7T1 1238 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 ANO7Q6IWH7 933 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 SEPT14Q6ZU15 432 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 TGFBRAP1Q8WUH2 860 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 CELF1Q92879 486 aaKnown RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 POP1Q99575 1024 aaKnown RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 IKZF4Q9H2S9 585 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 LAMB1P07942 1786 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 TAF1P21675 1872 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 DCCP43146 1447 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 TCRBV7S2A1N4TA0A589 114 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 LUC7L3O95232 432 aaKnown RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 GM2AP17900 193 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 KCNJ1P48048 391 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 ORC2Q13416 577 aaPredicted RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 TNIP1Q15025 636 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 LLGL1Q15334 1064 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 DIXDC1Q155Q3 683 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 FRMD5Q7Z6J6 570 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 ECHDC2Q86YB7 292 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 DZIP1Q86YF9 867 aaKnown RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 MARCH10Q8NA82 808 aaPredicted RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 CTNNBL1Q8WYA6 563 aaPredicted RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 TMEM237Q96Q45 408 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 NAP1L3Q99457 506 aaPredicted RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 TMEM109Q9BVC6 243 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 PIDD1Q9HB75 910 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 SEPT11Q9NVA2 429 aaKnown RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 MTRF1LQ9UGC7 380 aaKnown RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 DDX25Q9UHL0 483 aaKnown RBP11.12□□□□□ -0.63
CLIP4-208ENST00000456385 RASAL2Q9UJF2 1139 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 INTUQ9ULD6 942 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 PCDHA12Q9UN75 941 aa11.12□□□□□ -0.63
CLIP4-208ENST00000456385 CLIC2O15247 247 aa11.11□□□□□ -0.63
CLIP4-208ENST00000456385 HIP1RO75146 1068 aa11.11□□□□□ -0.63
CLIP4-208ENST00000456385 PHF2O75151 1096 aa11.11□□□□□ -0.63
CLIP4-208ENST00000456385 UNC5CO95185 931 aa11.11□□□□□ -0.63
CLIP4-208ENST00000456385 RARGP13631 454 aa11.11□□□□□ -0.63
CLIP4-208ENST00000456385 CCNB1P14635 433 aa11.11□□□□□ -0.63
CLIP4-208ENST00000456385 KCNA1Q09470 495 aa11.11□□□□□ -0.63
CLIP4-208ENST00000456385 SPTY2D1Q68D10 685 aaPredicted RBP11.11□□□□□ -0.63
CLIP4-208ENST00000456385 MFSD5Q6N075 450 aa11.11□□□□□ -0.63
CLIP4-208ENST00000456385 CCDC137Q6PK04 289 aaKnown RBP11.11□□□□□ -0.63
CLIP4-208ENST00000456385 BTNL9Q6UXG8 535 aa11.11□□□□□ -0.63
CLIP4-208ENST00000456385 TXNRD3Q86VQ6 643 aa11.11□□□□□ -0.63
CLIP4-208ENST00000456385 SLC35C1Q96A29 364 aa11.11□□□□□ -0.63
CLIP4-208ENST00000456385 TGS1Q96RS0 853 aaKnown RBP11.11□□□□□ -0.63
CLIP4-208ENST00000456385 STMN4Q9H169 189 aaPredicted RBP11.11□□□□□ -0.63
CLIP4-208ENST00000456385 BSDC1Q9NW68 430 aaPredicted RBP11.11□□□□□ -0.63
CLIP4-208ENST00000456385 ALG6Q9Y672 507 aa11.11□□□□□ -0.63
CLIP4-208ENST00000456385 POTEFA5A3E0 1075 aa11.1□□□□□ -0.63
CLIP4-208ENST00000456385 TMEM110-MUSTN1A8MSY1 372 aa11.1□□□□□ -0.63
CLIP4-208ENST00000456385 O00370 1275 aa11.1□□□□□ -0.63
CLIP4-208ENST00000456385 SMIM24O75264 130 aa11.1□□□□□ -0.63
CLIP4-208ENST00000456385 CAMTA2O94983 1202 aa11.1□□□□□ -0.63
CLIP4-208ENST00000456385 FESP07332 822 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms