RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SOX5P35711 763 aa14.81□□□□□ -0.04
PTPRE-204ENST00000455661 PTGIRP43119 386 aa14.81□□□□□ -0.04
PTPRE-204ENST00000455661 PPP4CP60510 307 aa14.81□□□□□ -0.04
PTPRE-204ENST00000455661 UBE2SQ16763 222 aa14.81□□□□□ -0.04
PTPRE-204ENST00000455661 MFSD5Q6N075 450 aa14.81□□□□□ -0.04
PTPRE-204ENST00000455661 GJB7Q6PEY0 223 aa14.81□□□□□ -0.04
PTPRE-204ENST00000455661 UBL4BQ8N7F7 174 aa14.81□□□□□ -0.04
PTPRE-204ENST00000455661 WDR66Q8TBY9 1149 aa14.81□□□□□ -0.04
PTPRE-204ENST00000455661 PRCCQ92733 491 aaPredicted RBP14.81□□□□□ -0.04
PTPRE-204ENST00000455661 C18orf8Q96DM3 657 aa14.81□□□□□ -0.04
PTPRE-204ENST00000455661 CEP95Q96GE4 821 aa14.81□□□□□ -0.04
PTPRE-204ENST00000455661 FGFR1OP2Q9NVK5 253 aa14.81□□□□□ -0.04
PTPRE-204ENST00000455661 TAF1P21675 1872 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 KRT16P08779 473 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 RPL21P46778 160 aaKnown RBP14.8□□□□□ -0.04
PTPRE-204ENST00000455661 CASP5P51878 434 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 C11orf91Q3C1V1 193 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 NUGGCQ68CJ6 796 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 MIS18BP1Q6P0N0 1132 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 SPATA21Q7Z572 469 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 TBC1D16Q8TBP0 767 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 MGARPQ8TDB4 240 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 ZNF483Q8TF39 744 aaPredicted RBP14.8□□□□□ -0.04
PTPRE-204ENST00000455661 ANKRD27Q96NW4 1050 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 DHX36Q9H2U1 1008 aaKnown RBP14.8□□□□□ -0.04
PTPRE-204ENST00000455661 RXFP1Q9HBX9 757 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 PCYOX1Q9UHG3 505 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 NR3C1P04150 777 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 VCAM1P19320 739 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 TNFAIP3P21580 790 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 SLC12A3P55017 1021 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 LRRC14Q15048 493 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 CCDC38Q502W7 563 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 ASPRV1Q53RT3 343 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 CDCA2Q69YH5 1023 aaPredicted RBP14.8□□□□□ -0.04
PTPRE-204ENST00000455661 EXOC3L1Q86VI1 746 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 ERICH1Q86X53 443 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 KIF2BQ8N4N8 673 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 SLC35C1Q96A29 364 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 RAB3IPQ96QF0 476 aaPredicted RBP14.8□□□□□ -0.04
PTPRE-204ENST00000455661 KIF9Q9HAQ2 790 aa14.8□□□□□ -0.04
PTPRE-204ENST00000455661 TYW1Q9NV66 732 aaKnown RBP14.8□□□□□ -0.04
PTPRE-204ENST00000455661 MIF4GDA9UHW6 222 aaKnown RBP14.79□□□□□ -0.04
PTPRE-204ENST00000455661 GJB6O95452 261 aa14.79□□□□□ -0.04
PTPRE-204ENST00000455661 GGPS1O95749 300 aa14.79□□□□□ -0.04
PTPRE-204ENST00000455661 ARSHQ5FYA8 562 aa14.79□□□□□ -0.04
PTPRE-204ENST00000455661 CLEC4GQ6UXB4 293 aa14.79□□□□□ -0.04
PTPRE-204ENST00000455661 STK33Q9BYT3 514 aa14.79□□□□□ -0.04
PTPRE-204ENST00000455661 SEPT11Q9NVA2 429 aaKnown RBP14.79□□□□□ -0.04
PTPRE-204ENST00000455661 PNMA6FA0A0J9YX94 578 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 PEX19P40855 299 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 CCNG1P51959 295 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 BLMHQ13867 455 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 GIT2Q14161 759 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 DIXDC1Q155Q3 683 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 ANKRD20A2Q5SQ80 823 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 ANKRD20A1Q5TYW2 823 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 ANKRD20A3Q5VUR7 823 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 CCDC137Q6PK04 289 aaKnown RBP14.78□□□□□ -0.04
PTPRE-204ENST00000455661 TRMT10CQ7L0Y3 403 aaKnown RBP14.78□□□□□ -0.04
PTPRE-204ENST00000455661 SFR1Q86XK3 245 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 RHOT2Q8IXI1 618 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 SPICE1Q8N0Z3 855 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 ARHGEF2Q92974 986 aaKnown RBP14.78□□□□□ -0.04
PTPRE-204ENST00000455661 SH3GL3Q99963 347 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 TMOD4Q9NZQ9 345 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 SNED1Q8TER0 1413 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 NAV1Q8NEY1 1877 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 IGSF9BQ9UPX0 1349 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 TMEM120BA0PK00 339 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 ANKRD62A6NC57 917 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 WFS1O76024 890 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 PLCG2P16885 1265 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 CLK2P49760 499 aaKnown RBP14.78□□□□□ -0.04
PTPRE-204ENST00000455661 MKRN3Q13064 507 aaKnown RBP14.78□□□□□ -0.04
PTPRE-204ENST00000455661 SEL1L2Q5TEA6 688 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 EPM2AIP1Q7L775 607 aaPredicted RBP14.78□□□□□ -0.04
PTPRE-204ENST00000455661 TEX9Q8N6V9 391 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 ALG3Q92685 438 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 SERPINB12Q96P63 405 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 KCNK9Q9NPC2 374 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 KLHL14Q9P2G3 628 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 DNAJC12Q9UKB3 198 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 PCDHB13Q9Y5F0 798 aa14.78□□□□□ -0.04
PTPRE-204ENST00000455661 A8MUI8 341 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 HIP1RO75146 1068 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 CTNNA2P26232 953 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 SKIV2L2P42285 1042 aaKnown RBP14.77□□□□□ -0.04
PTPRE-204ENST00000455661 CALCOCO2Q13137 446 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 DRAP1Q14919 205 aaPredicted RBP14.77□□□□□ -0.04
PTPRE-204ENST00000455661 TAF11Q15544 211 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 ASRGL1Q7L266 308 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 CYFIP1Q7L576 1253 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 CCDC25Q86WR0 208 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 CCDC105Q8IYK2 499 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 PRELID2Q8N945 189 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 ART4Q93070 314 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 THAP2Q9H0W7 228 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 BTG4Q9NY30 223 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 ADAM22Q9P0K1 906 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms