RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 IL9P15248 144 aa14.42□□□□□ -0.1
CHD3-206ENST00000452447 LAG3P18627 525 aa14.42□□□□□ -0.1
CHD3-206ENST00000452447 RFC5P40937 340 aa14.42□□□□□ -0.1
CHD3-206ENST00000452447 CYP4A11Q02928 519 aa14.42□□□□□ -0.1
CHD3-206ENST00000452447 UBE3AQ05086 875 aa14.42□□□□□ -0.1
CHD3-206ENST00000452447 TPH2Q8IWU9 490 aa14.42□□□□□ -0.1
CHD3-206ENST00000452447 FAM178BQ8IXR5 827 aa14.42□□□□□ -0.1
CHD3-206ENST00000452447 WRAP73Q9P2S5 460 aaPredicted RBP14.42□□□□□ -0.1
CHD3-206ENST00000452447 NEMFO60524 1076 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 FGF18O76093 207 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 SSTR3P32745 418 aaPredicted RBP14.41□□□□□ -0.1
CHD3-206ENST00000452447 IRS1P35568 1242 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 SPIRE1Q08AE8 756 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 CTTNQ14247 550 aaKnown RBP14.41□□□□□ -0.1
CHD3-206ENST00000452447 CTC1Q2NKJ3 1217 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 XKR9Q5GH70 373 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 TWF2Q6IBS0 349 aaKnown RBP14.41□□□□□ -0.1
CHD3-206ENST00000452447 KSR1Q8IVT5 923 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 GJD3Q8N144 294 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 LRRC43Q8N309 656 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 COLGALT1Q8NBJ5 622 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 DYDC2Q96IM9 177 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 CASD1Q96PB1 797 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 C1QTNF1Q9BXJ1 281 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 TTC12Q9H892 705 aaPredicted RBP14.41□□□□□ -0.1
CHD3-206ENST00000452447 TLR9Q9NR96 1032 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 HCSTQ9UBK5 93 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 PIN4Q9Y237 131 aaKnown RBP14.41□□□□□ -0.1
CHD3-206ENST00000452447 COL4A3BPQ9Y5P4 624 aa14.41□□□□□ -0.1
CHD3-206ENST00000452447 GAS2O43903 313 aaKnown RBP14.4□□□□□ -0.1
CHD3-206ENST00000452447 SKIP12755 728 aa14.4□□□□□ -0.1
CHD3-206ENST00000452447 GTF2F1P35269 517 aaKnown RBP eCLIP14.4□□□□□ -0.1
CHD3-206ENST00000452447 LTBRP36941 435 aa14.4□□□□□ -0.1
CHD3-206ENST00000452447 CATSPER4Q7RTX7 472 aa14.4□□□□□ -0.1
CHD3-206ENST00000452447 RBM23Q86U06 439 aaKnown RBP14.4□□□□□ -0.1
CHD3-206ENST00000452447 CCDC83Q8IWF9 413 aa14.4□□□□□ -0.1
CHD3-206ENST00000452447 ZNF579Q8NAF0 562 aaKnown RBP14.4□□□□□ -0.1
CHD3-206ENST00000452447 PRPF31Q8WWY3 499 aaKnown RBP14.4□□□□□ -0.1
CHD3-206ENST00000452447 PSPC1Q8WXF1 523 aaKnown RBP14.4□□□□□ -0.1
CHD3-206ENST00000452447 TMEM143Q96AN5 459 aa14.4□□□□□ -0.1
CHD3-206ENST00000452447 EIF2AK1Q9BQI3 630 aaKnown RBP14.4□□□□□ -0.1
CHD3-206ENST00000452447 LLPHQ9BRT6 129 aaKnown RBP14.4□□□□□ -0.1
CHD3-206ENST00000452447 DHX33Q9H6R0 707 aaKnown RBP14.4□□□□□ -0.1
CHD3-206ENST00000452447 CWH43Q9H720 699 aa14.4□□□□□ -0.1
CHD3-206ENST00000452447 PUF60Q9UHX1 559 aaKnown RBP14.4□□□□□ -0.1
CHD3-206ENST00000452447 SLITRK3O94933 977 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 SRGAP2CP0DJJ0 459 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 PPM1AP35813 382 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 TXKP42681 527 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 NRIP1P48552 1158 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 NDUFV1P49821 464 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 GUCY1B3Q02153 619 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 DLX2Q07687 328 aaPredicted RBP14.39□□□□□ -0.11
CHD3-206ENST00000452447 ST3GAL1Q11201 340 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 ADAM15Q13444 863 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 CLUL1Q15846 466 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 KCNT2Q6UVM3 1135 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 LRRC55Q6ZSA7 311 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 HELQQ8TDG4 1101 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 TCP11Q8WWU5 503 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 C8orf76Q96K31 380 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 ZSCAN31Q96LW9 406 aaPredicted RBP14.39□□□□□ -0.11
CHD3-206ENST00000452447 CCDC43Q96MW1 224 aaKnown RBP14.39□□□□□ -0.11
CHD3-206ENST00000452447 TLE6Q9H808 572 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 BMP2KQ9NSY1 1161 aaPredicted RBP14.39□□□□□ -0.11
CHD3-206ENST00000452447 RNF19AQ9NV58 838 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 LINC01565O15544 149 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 ATP2B1P20020 1258 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 PHKA2P46019 1235 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 KRT17Q04695 432 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 EMC2Q15006 297 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 CLLU1OSQ5K130 101 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 PDE12Q6L8Q7 609 aaKnown RBP14.39□□□□□ -0.11
CHD3-206ENST00000452447 ADGRD2Q7Z7M1 963 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 ZNF598Q86UK7 904 aaKnown RBP14.39□□□□□ -0.11
CHD3-206ENST00000452447 EFHBQ8N7U6 833 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 ZNF558Q96NG5 402 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 MTRQ99707 1265 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 TRAIPQ9BWF2 469 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 MRPL9Q9BYD2 267 aaKnown RBP14.39□□□□□ -0.11
CHD3-206ENST00000452447 IFT122Q9HBG6 1241 aa14.39□□□□□ -0.11
CHD3-206ENST00000452447 ARID2Q68CP9 1835 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 ZBTB39O15060 712 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 ASAP2O43150 1006 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 TBX10O75333 385 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 MCM7P33993 719 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 ALDH7A1P49419 539 aaKnown RBP14.38□□□□□ -0.11
CHD3-206ENST00000452447 RAB27AP51159 221 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 ERVFC1P60507 584 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 HMGN5P82970 282 aaKnown RBP14.38□□□□□ -0.11
CHD3-206ENST00000452447 PLCB3Q01970 1234 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 LAMTOR4Q0VGL1 99 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 GNL2Q13823 731 aaKnown RBP14.38□□□□□ -0.11
CHD3-206ENST00000452447 SRGAP1Q7Z6B7 1085 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 FAM184AQ8NB25 1140 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 RSPH1Q8WYR4 309 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 MRPS27Q92552 414 aaKnown RBP14.38□□□□□ -0.11
CHD3-206ENST00000452447 HSD17B14Q9BPX1 270 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 CD320Q9NPF0 282 aa14.38□□□□□ -0.11
CHD3-206ENST00000452447 SH2B1Q9NRF2 756 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms