RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 PPP1R3GB7ZBB8 358 aa15.51■□□□□ 0.07
SHMT2-203ENST00000449049 ASAP2O43150 1006 aa15.51■□□□□ 0.07
SHMT2-203ENST00000449049 CD44P16070 742 aaKnown RBP15.51■□□□□ 0.07
SHMT2-203ENST00000449049 NMT1P30419 496 aaKnown RBP15.51■□□□□ 0.07
SHMT2-203ENST00000449049 CASP5P51878 434 aa15.51■□□□□ 0.07
SHMT2-203ENST00000449049 LAMTOR4Q0VGL1 99 aa15.51■□□□□ 0.07
SHMT2-203ENST00000449049 CAPSQ13938 189 aa15.51■□□□□ 0.07
SHMT2-203ENST00000449049 TAF2Q6P1X5 1199 aa15.51■□□□□ 0.07
SHMT2-203ENST00000449049 ZNF720Q7Z2F6 126 aa15.51■□□□□ 0.07
SHMT2-203ENST00000449049 CTAGE1Q96RT6 745 aa15.51■□□□□ 0.07
SHMT2-203ENST00000449049 SIP14410 1827 aa15.51■□□□□ 0.07
SHMT2-203ENST00000449049 ARVCFO00192 962 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 PPP1R37O75864 691 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 PPP1R2P41236 205 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 PRCPP42785 496 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 SMTNP53814 917 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 ANO6Q4KMQ2 910 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 C11orf57Q6ZUT1 292 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-203ENST00000449049 ADSSL1Q8N142 457 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 MAP7D2Q96T17 732 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 TMEM106CQ9BVX2 250 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 TSPY26PQ9H489 355 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 KMT5AQ9NQR1 393 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 DACH1Q9UI36 760 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 ADGRA3Q8IWK6 1321 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 K7ENM7 598 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 EIF3DO15371 548 aaKnown RBP eCLIP15.5■□□□□ 0.07
SHMT2-203ENST00000449049 GCNT3O95395 438 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 MYBP10242 640 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 COL6A1P12109 1028 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 ALCAMQ13740 583 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 BMT2Q1RMZ1 405 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 CT47A1Q5JQC4 288 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-203ENST00000449049 SERINC5Q86VE9 423 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 RHPN2Q8IUC4 686 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 GUF1Q8N442 669 aaKnown RBP15.5■□□□□ 0.07
SHMT2-203ENST00000449049 TMEM161BQ8NDZ6 487 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 SCFD1Q8WVM8 642 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 DNAJC25Q9H1X3 360 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 ARHGAP28Q9P2N2 729 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 UBE4BO95155 1302 aa15.5■□□□□ 0.07
SHMT2-203ENST00000449049 EVPLQ92817 2033 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 CCDC169A6NNP5 214 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 H0YCG3 227 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 SLC16A4O15374 487 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 SCP2P22307 547 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 CDK7P50613 346 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 GTF2BQ00403 316 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 POU5F1BQ06416 359 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 TFDP1Q14186 410 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 PTGISQ16647 500 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 CDCA2Q69YH5 1023 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-203ENST00000449049 STXBP4Q6ZWJ1 553 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 HAUS6Q7Z4H7 955 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 KSR1Q8IVT5 923 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 MYOCDQ8IZQ8 938 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 ZNF507Q8TCN5 953 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 KIFC3Q9BVG8 833 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 FAM49AQ9H0Q0 323 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-203ENST00000449049 MAPK8IP1Q9UQF2 711 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 AKT3Q9Y243 479 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 LRRIQ4A6NIV6 560 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 KIF20AO95235 890 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 CAVIN2O95810 425 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 VTNP04004 478 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 STIM1Q13586 685 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 RPAINQ86UA6 219 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 NME8Q8N427 588 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 RNF149Q8NC42 400 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 DNAJB3Q8WWF6 145 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 HVCN1Q96D96 273 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 NFKBIZQ9BYH8 718 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 PCDHB13Q9Y5F0 798 aa15.49■□□□□ 0.07
SHMT2-203ENST00000449049 TRIP12Q14669 1992 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-203ENST00000449049 RPLP2P05387 115 aaKnown RBP15.48■□□□□ 0.07
SHMT2-203ENST00000449049 ABCD1P33897 745 aa15.48■□□□□ 0.07
SHMT2-203ENST00000449049 GPC3P51654 580 aa15.48■□□□□ 0.07
SHMT2-203ENST00000449049 CDC42EP1Q00587 391 aa15.48■□□□□ 0.07
SHMT2-203ENST00000449049 ZC2HC1CQ53FD0 456 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-203ENST00000449049 IFNLR1Q8IU57 520 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-203ENST00000449049 ZNF710Q8N1W2 664 aa15.48■□□□□ 0.07
SHMT2-203ENST00000449049 DEPTORQ8TB45 409 aa15.48■□□□□ 0.07
SHMT2-203ENST00000449049 DIS3LQ8TF46 1054 aaKnown RBP15.48■□□□□ 0.07
SHMT2-203ENST00000449049 DHTKD1Q96HY7 919 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-203ENST00000449049 BPIFA3Q9BQP9 254 aa15.48■□□□□ 0.07
SHMT2-203ENST00000449049 SENP6Q9GZR1 1112 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-203ENST00000449049 TRMT13Q9NUP7 481 aaKnown RBP15.48■□□□□ 0.07
SHMT2-203ENST00000449049 B4GALT4O60513 344 aa15.47■□□□□ 0.07
SHMT2-203ENST00000449049 ERCC5P28715 1186 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-203ENST00000449049 HOXD13P35453 343 aa15.47■□□□□ 0.07
SHMT2-203ENST00000449049 PTK7Q13308 1070 aa15.47■□□□□ 0.07
SHMT2-203ENST00000449049 L1TD1Q5T7N2 865 aaKnown RBP15.47■□□□□ 0.07
SHMT2-203ENST00000449049 ZNF410Q86VK4 478 aa15.47■□□□□ 0.07
SHMT2-203ENST00000449049 NLRP4Q96MN2 994 aa15.47■□□□□ 0.07
SHMT2-203ENST00000449049 NAT10Q9H0A0 1025 aaKnown RBP15.47■□□□□ 0.07
SHMT2-203ENST00000449049 C2orf40Q9H1Z8 148 aa15.47■□□□□ 0.07
SHMT2-203ENST00000449049 PHLPP2Q6ZVD8 1323 aa15.47■□□□□ 0.07
SHMT2-203ENST00000449049 DENND3A2RUS2 1198 aa15.47■□□□□ 0.07
SHMT2-203ENST00000449049 PSMA7O14818 248 aa15.47■□□□□ 0.07
SHMT2-203ENST00000449049 GPR32O75388 356 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms