RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 DMP1Q13316 513 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 MTF1Q14872 753 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 PPP2R5AQ15172 486 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 ARHGAP29Q52LW3 1261 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 FAM102BQ5T8I3 360 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 FAM160B1Q5W0V3 765 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 SYT10Q6XYQ8 523 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 SEPT14Q6ZU15 432 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 ANO5Q75V66 913 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 TXLNBQ8N3L3 684 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 C2orf69Q8N8R5 385 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 SPIRE2Q8WWL2 714 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 SYN2Q92777 582 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 DESI2Q9BSY9 194 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 ZNF408Q9H9D4 720 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 POLD4Q9HCU8 107 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 ZNF302Q9NR11 478 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 AGPAT3Q9NRZ7 376 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 DMAC2Q9NW81 257 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 MYO1AQ9UBC5 1043 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 DAAM1Q9Y4D1 1078 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 PPME1Q9Y570 386 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 DNAJC25-GNG10A0A024R161 153 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 ASB14A6NK59 587 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 KIF5CO60282 957 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 KLK7P49862 253 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 PRKCEQ02156 737 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 KCNMA1Q12791 1236 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 TCERG1LQ5VWI1 586 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 MAP1SQ66K74 1059 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 PLA2G4FQ68DD2 849 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 CYFIP1Q7L576 1253 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 MAEAQ7L5Y9 396 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 HAUS6Q7Z4H7 955 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 CCDC60Q8IWA6 550 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 GPRC5AQ8NFJ5 357 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 SMCR8Q8TEV9 937 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 IFT74Q96LB3 600 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 NTPCRQ9BSD7 190 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 ATP6V0A4Q9HBG4 840 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 GBA2Q9HCG7 927 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 PLCB1Q9NQ66 1216 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 CYP26B1Q9NR63 512 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 NRBP2Q9NSY0 501 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 SEPT9Q9UHD8 586 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 MAFBQ9Y5Q3 323 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 ZNFX1Q9P2E3 1918 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 SYNGAP1Q96PV0 1343 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 IGKV6D-21A0A0A0MT36 114 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 EIF3CLB5ME19 914 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 MAPK13O15264 365 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 ZNF862O60290 1169 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 EXOC3O60645 756 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 STBD1O95210 358 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 ZBTB48P10074 688 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 KRT13P13646 458 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 UBA1P22314 1058 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 CASQ1P31415 396 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 GJA5P36382 358 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 NPEPPSP55786 919 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 PEX3P56589 373 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 GNG11P61952 73 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 SP4Q02446 784 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 KCNA1Q09470 495 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 HSP90AA2PQ14568 343 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 EXOC3L4Q17RC7 722 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 DCAF17Q5H9S7 520 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 PDXDC1Q6P996 788 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 TRIM65Q6PJ69 517 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 WDR59Q6PJI9 974 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 METTL7BQ6UX53 244 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 GBP6Q6ZN66 633 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 ZNF662Q6ZS27 426 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 ANKRD23Q86SG2 305 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 FMNL3Q8IVF7 1028 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 EXOC8Q8IYI6 725 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 SEPT1Q8WYJ6 367 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 FAM167AQ96KS9 214 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 CCDC42Q96M95 316 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 EIF3CQ99613 913 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 CHP1Q99653 195 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 LSM14BQ9BX40 385 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 HAUS4Q9H6D7 363 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 TXNRD2Q9NNW7 524 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 KMT5AQ9NQR1 393 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 DNAI1Q9UI46 699 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 FBXL5Q9UKA1 691 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 MYO6Q9UM54 1294 aa11.56□□□□□ -0.56
VIPAS39-203ENST00000448935 CCL15-CCL14A0A0B4J2E2 113 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 SSU72P8A0A1W2PR75 194 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 CCDC169A6NNP5 214 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 PDHXO00330 501 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 NKRFO15226 690 aaKnown RBP eCLIP11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 FARP2O94887 1054 aaPredicted RBP11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 SP2Q02086 613 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 SPA17Q15506 151 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 CCL15Q16663 113 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 Q3C1V9 767 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 WDR78Q5VTH9 848 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 SFMBT2Q5VUG0 894 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms