RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 RNF111Q6ZNA4 994 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 ADGRA1Q86SQ6 560 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 ZNF296Q8WUU4 475 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 ERO1AQ96HE7 468 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 SIGLEC10Q96LC7 697 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 CRBNQ96SW2 442 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 DNAJC2Q99543 621 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 KIF2CQ99661 725 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 PTPN18Q99952 460 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 RIOK1Q9BRS2 568 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 HDAC8Q9BY41 377 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 BOLA2Q9H3K6 86 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 RWDD1Q9H446 243 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 ATP8A2Q9NTI2 1148 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 AFG3L2Q9Y4W6 797 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 BTBD19C9JJ37 291 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 HRKO00198 91 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 NRDCO43847 1150 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 TLR2O60603 784 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 CTSHP09668 335 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 DAB2P98082 770 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 SP3Q02447 781 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 NMIQ13287 307 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 CRHR2Q13324 411 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 PRRT2Q7Z6L0 340 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 MAPKAPK5Q8IW41 473 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 CRACR2BQ8N4Y2 399 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 KBTBD3Q8NAB2 608 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 ENOX1Q8TC92 643 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 SYTL5Q8TDW5 730 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 ABHD8Q96I13 439 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 RHOVQ96L33 236 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 ASCC2Q9H1I8 757 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 AS3MTQ9HBK9 375 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 RTEL1Q9NZ71 1219 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 SERPINB13Q9UIV8 391 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 IRAK3Q9Y616 596 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 ZHX2Q9Y6X8 837 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 DOCK1Q14185 1865 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 CDK5RAP2Q96SN8 1893 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 MYH1P12882 1939 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 ZNF532Q9HCE3 1301 aa9.29□□□□□ -0.92
SMARCE1-206ENST00000447024 C19orf81C9J6K1 198 aa9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 DYNLL1P63167 89 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 PSMD2Q13200 908 aa9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 PABPC4Q13310 644 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 GIMAP6Q6P9H5 292 aa9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 AMOTL1Q8IY63 956 aa9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 MIGA1Q8NAN2 632 aa9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 MAP6Q96JE9 813 aa9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 PARK7Q99497 189 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 FOXP3Q9BZS1 431 aa9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 STAP2Q9UGK3 403 aa9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 ZMYM5Q9UJ78 669 aa9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 PALD1Q9ULE6 856 aa9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 MYH7P12883 1935 aa9.28□□□□□ -0.92
SMARCE1-206ENST00000447024 ANKRD33BA6NCL7 494 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 SMARCA5O60264 1052 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 SYN1P17600 705 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 GNAT2P19087 354 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 MX1P20591 662 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 KIR2DL1P43626 348 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 KIR2DL2P43627 348 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 EPHB3P54753 998 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 PRMT2P55345 433 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 MOGSQ13724 837 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 KIF22Q14807 665 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 TATDN1Q6P1N9 297 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 FBXO46Q6PJ61 603 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 SMC5Q8IY18 1101 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 FAM43AQ8N2R8 423 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 CRTAC1Q9NQ79 661 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 SWAP70Q9UH65 585 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 PTPRFP10586 1907 aa9.27□□□□□ -0.93
SMARCE1-206ENST00000447024 PDHXO00330 501 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 GBP1P32455 592 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 BACE1P56817 501 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 CHMP4BP1P59074 171 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 GABPAQ06546 454 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 SLC14A2Q15849 920 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 ANKRD45Q5TZF3 282 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 C17orf99Q6UX52 265 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 CEP128Q6ZU80 1094 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 APPBP2Q92624 585 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 TCTN2Q96GX1 697 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 XYLT2Q9H1B5 865 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 CABP5Q9NP86 173 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 SIRT5Q9NXA8 310 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 MCM9Q9NXL9 1143 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 AGTPBP1Q9UPW5 1226 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 SALL3Q9BXA9 1300 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 PHIPQ8WWQ0 1821 aa9.26□□□□□ -0.93
SMARCE1-206ENST00000447024 TMEM82A0PJX8 343 aa9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 RNF113AO15541 343 aaKnown RBP9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 HOXD10P28358 340 aa9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 HOXA7P31268 230 aaPredicted RBP9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 VIPR1P32241 457 aa9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 GCLCP48506 637 aaPredicted RBP9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 AFF3P51826 1226 aaKnown RBP9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 SPP2Q13103 211 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms