RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 TAX1BP1Q86VP1 789 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.4■□□□□ 0.06
ERCC3-203ENST00000445889 ERP44Q9BS26 406 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 ALG6Q9Y672 507 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 CREB1P16220 341 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 ATP2B4P23634 1241 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 RBM5P52756 815 aaKnown RBP eCLIP15.39■□□□□ 0.05
ERCC3-203ENST00000445889 PMS2P54278 862 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 MESDQ14696 234 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 PPP1R7Q15435 360 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 PHLDB3Q6NSJ2 640 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 HIBCHQ6NVY1 386 aaPredicted RBP15.39■□□□□ 0.05
ERCC3-203ENST00000445889 LRRC34Q8IZ02 419 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 ZSWIM2Q8NEG5 633 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 TCP11Q8WWU5 503 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 N4BP2L2Q92802 583 aaPredicted RBP15.39■□□□□ 0.05
ERCC3-203ENST00000445889 KAT5Q92993 513 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 CHMP6Q96FZ7 201 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 FAM163AQ96GL9 167 aaPredicted RBP15.39■□□□□ 0.05
ERCC3-203ENST00000445889 SLITRK6Q9H5Y7 841 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 CTTNBP2NLQ9P2B4 639 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 BAIAP2L1Q9UHR4 511 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 ODF2LQ9ULJ1 636 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 PITPNM2Q9BZ72 1349 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.39■□□□□ 0.05
ERCC3-203ENST00000445889 FMO5P49326 533 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 AGBL2Q5U5Z8 902 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 PHLDB2Q86SQ0 1253 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 JAMLQ86YT9 394 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 SLFN12Q8IYM2 578 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 SYCE1Q8N0S2 351 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 SLC30A5Q8TAD4 765 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 ERMNQ8TAM6 284 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 DYDC2Q96IM9 177 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 GPR88Q9GZN0 384 aa15.39■□□□□ 0.05
ERCC3-203ENST00000445889 ACTR5Q9H9F9 607 aaPredicted RBP15.39■□□□□ 0.05
ERCC3-203ENST00000445889 DDTLA6NHG4 134 aaPredicted RBP15.38■□□□□ 0.05
ERCC3-203ENST00000445889 DDX39AO00148 427 aaKnown RBP15.38■□□□□ 0.05
ERCC3-203ENST00000445889 CLSTN1O94985 981 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 CALCAP01258 141 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 FERP16591 822 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 TTC27Q6P3X3 843 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 FOXR2Q6PJQ5 311 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 PNMA8AQ86V59 439 aaPredicted RBP15.38■□□□□ 0.05
ERCC3-203ENST00000445889 KIAA0825Q8IV33 1275 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 SLF2Q8IX21 1173 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 RFFLQ8WZ73 363 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 SGSM3Q96HU1 749 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 ZDHHC18Q9NUE0 388 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 GGA2Q9UJY4 613 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 NENFQ9UMX5 172 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 PPP1R12BO60237 982 aaPredicted RBP15.38■□□□□ 0.05
ERCC3-203ENST00000445889 CLTAP09496 248 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 NF2P35240 595 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 RPL21P46778 160 aaKnown RBP15.38■□□□□ 0.05
ERCC3-203ENST00000445889 NT5C2P49902 561 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 PLCB4Q15147 1175 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 FAM114A2Q9NRY5 505 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 MYO3BQ8WXR4 1341 aa15.38■□□□□ 0.05
ERCC3-203ENST00000445889 NAV1Q8NEY1 1877 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 CFBP00751 764 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 FTLP02792 175 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-203ENST00000445889 SERPINB2P05120 415 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 PSMC2P35998 433 aaKnown RBP15.37■□□□□ 0.05
ERCC3-203ENST00000445889 PTENP60484 403 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 KLRC3Q07444 240 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 NEDD9Q14511 834 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 KIAA1755Q5JYT7 1200 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 DENND2CQ68D51 928 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 DUPD1Q68J44 220 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 PPP1R18Q6NYC8 613 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 ZDHHC24Q6UX98 284 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 TBC1D1Q86TI0 1168 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-203ENST00000445889 EIF1ADQ8N9N8 165 aaKnown RBP15.37■□□□□ 0.05
ERCC3-203ENST00000445889 CCT6BQ92526 530 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 ADAM7Q9H2U9 754 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 UBE2TQ9NPD8 197 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-203ENST00000445889 WRAP73Q9P2S5 460 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-203ENST00000445889 RGS16O15492 202 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-203ENST00000445889 PPFIA2O75334 1257 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 PPATQ06203 517 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 DRP2Q13474 957 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 ERMARDQ5T6L9 678 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 MSL1Q68DK7 614 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 NSMFQ6X4W1 530 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 SIAH1Q8IUQ4 282 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 BORCS6Q96GS4 357 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 METTL14Q9HCE5 456 aaKnown RBP15.37■□□□□ 0.05
ERCC3-203ENST00000445889 BHMG1C9JSJ3 638 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-203ENST00000445889 F5H6K3 240 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 KIAA0391O15091 583 aaKnown RBP15.37■□□□□ 0.05
ERCC3-203ENST00000445889 SNX1Q13596 522 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 TRIP13Q15645 432 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-203ENST00000445889 NEK9Q8TD19 979 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 NGLY1Q96IV0 654 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 STK33Q9BYT3 514 aa15.37■□□□□ 0.05
ERCC3-203ENST00000445889 INTS2Q9H0H0 1204 aaKnown RBP15.37■□□□□ 0.05
ERCC3-203ENST00000445889 COL14A1Q05707 1796 aaKnown RBP15.36■□□□□ 0.05
ERCC3-203ENST00000445889 ZMYM2Q9UBW7 1377 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 EXOC3O60645 756 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms