RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 APBA1Q02410 837 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 ZNF667Q5HYK9 610 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 MAP7D3Q8IWC1 876 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 LMNTD2Q8IXW0 634 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 ZNF564Q8TBZ8 553 aaPredicted RBP8.58□□□□□ -1.04
RIF1-205ENST00000444746 REEP2Q9BRK0 252 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 LRRC1Q9BTT6 524 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 MAGEF1Q9HAY2 307 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 SARS2Q9NP81 518 aaKnown RBP8.58□□□□□ -1.04
RIF1-205ENST00000444746 CNOT7Q9UIV1 285 aaKnown RBP8.58□□□□□ -1.04
RIF1-205ENST00000444746 TRPA1O75762 1119 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 UPP2O95045 317 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 RWDD2BP57060 319 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 RNF135Q8IUD6 432 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 RNF149Q8NC42 400 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 KAZALD1Q96I82 304 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 SH3GLB2Q9NR46 395 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 CASP4P49662 377 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 RASSF2P50749 326 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 ZBTB41Q5SVQ8 909 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 SH2D3CQ8N5H7 860 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 RPGRIP1Q96KN7 1286 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 TAAR1Q96RJ0 339 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 CEP72Q9P209 647 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 ZNF70Q9UC06 446 aaPredicted RBP8.57□□□□□ -1.04
RIF1-205ENST00000444746 HPS5Q9UPZ3 1129 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 JRKLQ9Y4A0 524 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 PREX2Q70Z35 1606 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 ARHGAP25P42331 645 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 PSMD2Q13200 908 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 ARL6IP4Q66PJ3 421 aaKnown RBP8.57□□□□□ -1.04
RIF1-205ENST00000444746 LCA5Q86VQ0 697 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 CCDC68Q9H2F9 335 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 MTMR4Q9NYA4 1195 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 AMACRQ9UHK6 382 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 ANGPTL3Q9Y5C1 460 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 H0YCG3 227 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 ZWINTO95229 277 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 MAP3K6O95382 1288 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 SRGAP2BP0DMP2 458 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 THOC5Q13769 683 aaKnown RBP8.57□□□□□ -1.04
RIF1-205ENST00000444746 PRPSAP1Q14558 356 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 RABL6Q3YEC7 729 aaPredicted RBP8.57□□□□□ -1.04
RIF1-205ENST00000444746 CCDC197Q8NCU1 140 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 SLITRK6Q9H5Y7 841 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 SLC37A4O43826 429 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 GPC4O75487 556 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 PDGFRBP09619 1106 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 NUGGCQ68CJ6 796 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 MCTP2Q6DN12 878 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 XXYLT1Q8NBI6 393 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 ACER1Q8TDN7 264 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 SPDL1Q96EA4 605 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 NUF2Q9BZD4 464 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 FHOD1Q9Y613 1164 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 PLEKP08567 350 aaPredicted RBP8.57□□□□□ -1.04
RIF1-205ENST00000444746 CYP2B6P20813 491 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 BPIFB4P59827 614 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 AMHR2Q16671 573 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 RAD9BQ6WBX8 426 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 PYROXD1Q8WU10 500 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 TYW1Q9NV66 732 aaKnown RBP8.57□□□□□ -1.04
RIF1-205ENST00000444746 DCTN4Q9UJW0 460 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 RSPH10B2B2RC85 870 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 STXBP3O00186 592 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 CSDE1O75534 798 aaKnown RBP8.57□□□□□ -1.04
RIF1-205ENST00000444746 P4HBP07237 508 aaKnown RBP8.57□□□□□ -1.04
RIF1-205ENST00000444746 RSPH10BP0C881 870 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 NR1D1P20393 614 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 GNA15P30679 374 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 LRRC63Q05C16 580 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 PCGF5Q86SE9 256 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 DDX42Q86XP3 938 aaKnown RBP eCLIP8.57□□□□□ -1.04
RIF1-205ENST00000444746 NEDD1Q8NHV4 660 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 UBA3Q8TBC4 463 aa8.57□□□□□ -1.04
RIF1-205ENST00000444746 DYNC1LI2O43237 492 aaPredicted RBP8.56□□□□□ -1.04
RIF1-205ENST00000444746 RARBP10826 455 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 SOX5P35711 763 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 QARSP47897 775 aaKnown RBP8.56□□□□□ -1.04
RIF1-205ENST00000444746 ATXN3P54252 364 aaPredicted RBP8.56□□□□□ -1.04
RIF1-205ENST00000444746 NFIAQ12857 509 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 RNF217Q8TC41 542 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 SLC13A1Q9BZW2 595 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 VPS11Q9H270 941 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 UBE4BO95155 1302 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 TRPM1Q7Z4N2 1603 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 CA4P22748 312 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 ATP2C1P98194 919 aaPredicted RBP8.56□□□□□ -1.04
RIF1-205ENST00000444746 CC2D1AQ6P1N0 951 aaPredicted RBP8.56□□□□□ -1.04
RIF1-205ENST00000444746 PDXDC1Q6P996 788 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 PODNQ7Z5L7 613 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 SRRM1Q8IYB3 904 aaKnown RBP8.56□□□□□ -1.04
RIF1-205ENST00000444746 NSUN6Q8TEA1 469 aaKnown RBP8.56□□□□□ -1.04
RIF1-205ENST00000444746 OSBPL9Q96SU4 736 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 GPRC5CQ9NQ84 441 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 AFF4Q9UHB7 1163 aaKnown RBP8.56□□□□□ -1.04
RIF1-205ENST00000444746 WDR64B1ANS9 1081 aa8.56□□□□□ -1.04
RIF1-205ENST00000444746 CD44P16070 742 aaKnown RBP8.56□□□□□ -1.04
RIF1-205ENST00000444746 YWHABP31946 246 aaKnown RBP8.56□□□□□ -1.04
RIF1-205ENST00000444746 MAGOHP61326 146 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms