RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 EFCAB6Q5THR3 1501 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 CEP152O94986 1710 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 FAM90A27PA6NNH2 459 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 MATN3O15232 486 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 FOXP2O15409 715 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 GPR42O15529 346 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 MAFO75444 373 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 RAPGEF3O95398 923 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 IL18BPO95998 194 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 TACR2P21452 398 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 FLT3P36888 993 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 JAM2P57087 298 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 ZXDAP98168 799 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 ICAM4Q14773 271 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 PRKD1Q15139 912 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 PHF19Q5T6S3 580 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 GPR155Q7Z3F1 870 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 POLNQ7Z5Q5 900 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 CISD2Q8N5K1 135 aaKnown RBP4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 SH3RF3Q8TEJ3 882 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 LPPQ93052 612 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 WNK4Q96J92 1243 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 ZDHHC5Q9C0B5 715 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 OR10A5Q9H207 317 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 C14orf93Q9H972 538 aaKnown RBP4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 SLC52A2Q9HAB3 445 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 PUF60Q9UHX1 559 aaKnown RBP4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 CBLCQ9ULV8 474 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 OAZ3Q9UMX2 235 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 RNF123Q5XPI4 1314 aa4.41□□□□□ -1.7
HMGB3P11-201ENST00000440127 hCG_2014768A0A024R1R8 64 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 A0A0G2JNJ9 132 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 TCRBV5S4A2TA0A5A2 114 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 ARHGAP6O43182 974 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 KCNQ2O43526 872 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 C4BPAP04003 597 aaKnown RBP4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 AMY2AP04746 511 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 AMY2BP19961 511 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 CR2P20023 1033 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 COMTP21964 271 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 PPP2R1AP30153 589 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 ECE1P42892 770 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 HHEXQ03014 270 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 NFYCQ13952 458 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 STILQ15468 1287 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 FOXB2Q5VYV0 432 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 GRAMD4Q6IC98 578 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 CYB5RLQ6IPT4 315 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 ZNF585AQ6P3V2 769 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 C2orf69Q8N8R5 385 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 SH3TC2Q8TF17 1288 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 DNAJC7Q99615 494 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 BOCQ9BWV1 1114 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 CHMP4AQ9BY43 222 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 C12orf65Q9H3J6 166 aaKnown RBP4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 SMURF1Q9HCE7 757 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 CD248Q9HCU0 757 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 Q9UFV3 132 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 ZFR2Q9UPR6 939 aaKnown RBP4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 NRXN1Q9ULB1 1477 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 KIAA1210Q9ULL0 1709 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 ZMYM4Q5VZL5 1548 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 CENPJQ9HC77 1338 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 FRMPD1Q5SYB0 1578 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 UGGT1Q9NYU2 1555 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 HECW2Q9P2P5 1572 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 NPC1L1Q9UHC9 1359 aa4.4□□□□□ -1.71
HMGB3P11-201ENST00000440127 MAP3K4Q9Y6R4 1608 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 NOS1P29475 1434 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 NPATQ14207 1427 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 IQGAP1P46940 1657 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 PPRC1Q5VV67 1664 aaKnown RBP4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 SCDO00767 359 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 PLD2O14939 933 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 CDC14BO60729 498 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 FZD7O75084 574 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 RAD17O75943 681 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 C6P13671 934 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 APEX1P27695 318 aaKnown RBP4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 SDHAP31040 664 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 FNTBP49356 437 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 KCNQ1P51787 676 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 IGBP1P78318 339 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 IL13RA1P78552 427 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 EIF4HQ15056 248 aaKnown RBP4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 WDR43Q15061 677 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 RNF187Q5TA31 235 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 BRAPQ7Z569 592 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 TAX1BP1Q86VP1 789 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 NME9Q86XW9 330 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 LILRB2Q8N423 598 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 JMYQ8N9B5 988 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 OR10A2Q9H208 303 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 VPS11Q9H270 941 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 NELFAQ9H3P2 528 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 PCIF1Q9H4Z3 704 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 CABP5Q9NP86 173 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 SLC52A1Q9NWF4 448 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms