RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 TDHQ8IZJ6 230 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 KRT222Q8N1A0 295 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 DHX58Q96C10 678 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 RPGRIP1Q96KN7 1286 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 C7orf25Q9BPX7 421 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 RAB34Q9BZG1 259 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 WNT8AQ9H1J5 351 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 RGL1Q9NZL6 768 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 DDX25Q9UHL0 483 aaKnown RBP5.24□□□□□ -1.57
EDEM3-203ENST00000439962 ZNF215Q9UL58 517 aaPredicted RBP5.24□□□□□ -1.57
EDEM3-203ENST00000439962 ATP8B3O60423 1300 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 PVALEFA0A1B0GWK0 134 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 POTEMA6NI47 508 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 SPATA31C2B4DYI2 1134 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 MSH4O15457 936 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 TADA3O75528 432 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 RPN1P04843 607 aaKnown RBP5.24□□□□□ -1.57
EDEM3-203ENST00000439962 INSRRP14616 1297 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 GCFC2P16383 781 aaKnown RBP5.24□□□□□ -1.57
EDEM3-203ENST00000439962 KCNA2P16389 499 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 FXR2P51116 673 aaKnown RBP eCLIP5.24□□□□□ -1.57
EDEM3-203ENST00000439962 STAT5BP51692 787 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 CLCN3P51790 818 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 PSMD2Q13200 908 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 CTTNQ14247 550 aaKnown RBP5.24□□□□□ -1.57
EDEM3-203ENST00000439962 PDIA5Q14554 519 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 NONOQ15233 471 aaKnown RBP eCLIP5.24□□□□□ -1.57
EDEM3-203ENST00000439962 KIZQ2M2Z5 673 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 MTERF2Q49AM1 385 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 TAF3Q5VWG9 929 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 CYP26C1Q6V0L0 522 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 RUFY4Q6ZNE9 571 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 C16orf59Q7L2K0 433 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 TPH2Q8IWU9 490 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 ADSSL1Q8N142 457 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 GIMAP8Q8ND71 665 aaPredicted RBP5.24□□□□□ -1.57
EDEM3-203ENST00000439962 PPTC7Q8NI37 304 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 LMBR1Q8WVP7 490 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 HNRNPLLQ8WVV9 542 aaKnown RBP5.24□□□□□ -1.57
EDEM3-203ENST00000439962 C16orf70Q9BSU1 422 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 EHMT1Q9H9B1 1298 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 JADE2Q9NQC1 790 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 MRFAP1Q9Y605 127 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 FRYLO94915 3013 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 GSTTP1A0A1W2PQM5 241 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 C17orf102A2RUQ5 167 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 PSMA7O14818 248 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 PPFIA4O75335 1185 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 MCM3P25205 808 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 STAT6P42226 847 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 TECP42680 631 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 DNM2P50570 870 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 FXR1P51114 621 aaKnown RBP eCLIP5.23□□□□□ -1.57
EDEM3-203ENST00000439962 NPEPPSP55786 919 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 BRD3Q15059 726 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 SKIV2LQ15477 1246 aaKnown RBP5.23□□□□□ -1.57
EDEM3-203ENST00000439962 UGCGQ16739 394 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 WHAMMP3Q1A5X7 153 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 TCP11X2Q5H9J9 407 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 SPECC1Q5M775 1068 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 MOXD1Q6UVY6 613 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 SYT10Q6XYQ8 523 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 RSRC2Q7L4I2 434 aaKnown RBP5.23□□□□□ -1.57
EDEM3-203ENST00000439962 KSR1Q8IVT5 923 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 MNS1Q8NEH6 495 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 PIGOQ8TEQ8 1089 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 SEPT1Q8WYJ6 367 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 UBXN4Q92575 508 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 PKNOX2Q96KN3 472 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 GDF15Q99988 308 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 AGO4Q9HCK5 861 aaKnown RBP5.23□□□□□ -1.57
EDEM3-203ENST00000439962 SEPT9Q9UHD8 586 aaPredicted RBP5.23□□□□□ -1.57
EDEM3-203ENST00000439962 PNMA2Q9UL42 364 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 AKT3Q9Y243 479 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 USP20Q9Y2K6 914 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 ALPK3Q96L96 1907 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 A0A087X0B3 334 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 POTEB3A0JP26 581 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 LGALS16A8MUM7 142 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 PIK3CDO00329 1044 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 KIF5CO60282 957 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 CLSTN1O94985 981 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 TIMP1P01033 207 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 OR52Z1P0C646 297 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 MYBP10242 640 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 SREBF1P36956 1147 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 COPB1P53618 953 aaKnown RBP5.23□□□□□ -1.57
EDEM3-203ENST00000439962 GRIN1Q05586 938 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 PAN2Q504Q3 1202 aaKnown RBP5.23□□□□□ -1.57
EDEM3-203ENST00000439962 RRAGBQ5VZM2 374 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 POTEBQ6S5H4 581 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 CDR2LQ86X02 465 aaPredicted RBP5.23□□□□□ -1.57
EDEM3-203ENST00000439962 CCDC170Q8IYT3 715 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 TMEM199Q8N511 208 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 IGSF22Q8N9C0 903 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 DBF4BQ8NFT6 615 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 ERCC4Q92889 916 aaPredicted RBP5.23□□□□□ -1.57
EDEM3-203ENST00000439962 CCDC43Q96MW1 224 aaKnown RBP5.23□□□□□ -1.57
EDEM3-203ENST00000439962 MED15Q96RN5 788 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 DNAJC7Q99615 494 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms