RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 CARNS1A5YM72 827 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 BTBD18B2RXH4 712 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 NEMFO60524 1076 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 JAK2O60674 1132 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 IL9P15248 144 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 FGFR4P22455 802 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 CAMK1Q14012 370 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 EARS2Q5JPH6 523 aaKnown RBP21.02■□□□□ 0.96
CCDC78-204ENST00000439619 TPH2Q8IWU9 490 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 GJD3Q8N144 294 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 TNFRSF25Q93038 417 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 ZNF558Q96NG5 402 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 CASD1Q96PB1 797 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 TLE6Q9H808 572 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 PRKAG3Q9UGI9 489 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 PIN4Q9Y237 131 aaKnown RBP21.02■□□□□ 0.96
CCDC78-204ENST00000439619 LZTS1Q9Y250 596 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 BDP1A6H8Y1 2624 aa21.02■□□□□ 0.96
CCDC78-204ENST00000439619 ASAP2O43150 1006 aa21.01■□□□□ 0.95
CCDC78-204ENST00000439619 CSDE1O75534 798 aaKnown RBP21.01■□□□□ 0.95
CCDC78-204ENST00000439619 SEC24BO95487 1268 aa21.01■□□□□ 0.95
CCDC78-204ENST00000439619 DNAJB1P25685 340 aa21.01■□□□□ 0.95
CCDC78-204ENST00000439619 RAB27AP51159 221 aa21.01■□□□□ 0.95
CCDC78-204ENST00000439619 FOSBP53539 338 aa21.01■□□□□ 0.95
CCDC78-204ENST00000439619 NPEPPSP55786 919 aa21.01■□□□□ 0.95
CCDC78-204ENST00000439619 CYP4A11Q02928 519 aa21.01■□□□□ 0.95
CCDC78-204ENST00000439619 XKR9Q5GH70 373 aa21.01■□□□□ 0.95
CCDC78-204ENST00000439619 DYDC2Q96IM9 177 aa21.01■□□□□ 0.95
CCDC78-204ENST00000439619 ZSCAN31Q96LW9 406 aaPredicted RBP21.01■□□□□ 0.95
CCDC78-204ENST00000439619 LLPHQ9BRT6 129 aaKnown RBP21.01■□□□□ 0.95
CCDC78-204ENST00000439619 TRAIPQ9BWF2 469 aa21.01■□□□□ 0.95
CCDC78-204ENST00000439619 DHX33Q9H6R0 707 aaKnown RBP21.01■□□□□ 0.95
CCDC78-204ENST00000439619 RGL1Q9NZL6 768 aa21.01■□□□□ 0.95
CCDC78-204ENST00000439619 FAM205CA6NFA0 338 aa21■□□□□ 0.95
CCDC78-204ENST00000439619 SRGAP2BP0DMP2 458 aa21■□□□□ 0.95
CCDC78-204ENST00000439619 NRIP1P48552 1158 aa21■□□□□ 0.95
CCDC78-204ENST00000439619 PLCB3Q01970 1234 aa21■□□□□ 0.95
CCDC78-204ENST00000439619 ADAM15Q13444 863 aa21■□□□□ 0.95
CCDC78-204ENST00000439619 CTTNQ14247 550 aaKnown RBP21■□□□□ 0.95
CCDC78-204ENST00000439619 BMS1Q14692 1282 aaKnown RBP21■□□□□ 0.95
CCDC78-204ENST00000439619 KCNT2Q6UVM3 1135 aa21■□□□□ 0.95
CCDC78-204ENST00000439619 SRGAP1Q7Z6B7 1085 aa21■□□□□ 0.95
CCDC78-204ENST00000439619 EFHBQ8N7U6 833 aa21■□□□□ 0.95
CCDC78-204ENST00000439619 MRPS27Q92552 414 aaKnown RBP21■□□□□ 0.95
CCDC78-204ENST00000439619 PGBD4Q96DM1 585 aa21■□□□□ 0.95
CCDC78-204ENST00000439619 POP1Q99575 1024 aaKnown RBP21■□□□□ 0.95
CCDC78-204ENST00000439619 CDCA3Q99618 268 aaPredicted RBP21■□□□□ 0.95
CCDC78-204ENST00000439619 CWH43Q9H720 699 aa21■□□□□ 0.95
CCDC78-204ENST00000439619 TTC12Q9H892 705 aaPredicted RBP21■□□□□ 0.95
CCDC78-204ENST00000439619 CD207Q9UJ71 328 aa21■□□□□ 0.95
CCDC78-204ENST00000439619 SRGAP2CP0DJJ0 459 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 IRS1P35568 1242 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 LTBRP36941 435 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 TXKP42681 527 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 PHKA2P46019 1235 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 ALDH7A1P49419 539 aaKnown RBP20.99■□□□□ 0.95
CCDC78-204ENST00000439619 HMGN5P82970 282 aaKnown RBP20.99■□□□□ 0.95
CCDC78-204ENST00000439619 SPIRE1Q08AE8 756 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 NCBP1Q09161 790 aaKnown RBP20.99■□□□□ 0.95
CCDC78-204ENST00000439619 SMAD4Q13485 552 aaKnown RBP20.99■□□□□ 0.95
CCDC78-204ENST00000439619 GNL2Q13823 731 aaKnown RBP20.99■□□□□ 0.95
CCDC78-204ENST00000439619 EMC2Q15006 297 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 GLB1LQ6UWU2 654 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 RBM23Q86U06 439 aaKnown RBP20.99■□□□□ 0.95
CCDC78-204ENST00000439619 KSR1Q8IVT5 923 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 FAM184AQ8NB25 1140 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 HELQQ8TDG4 1101 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 PRPF31Q8WWY3 499 aaKnown RBP20.99■□□□□ 0.95
CCDC78-204ENST00000439619 TMEM143Q96AN5 459 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 C8orf76Q96K31 380 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 MTRQ99707 1265 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 EIF2AK1Q9BQI3 630 aaKnown RBP20.99■□□□□ 0.95
CCDC78-204ENST00000439619 SH2B1Q9NRF2 756 aaPredicted RBP20.99■□□□□ 0.95
CCDC78-204ENST00000439619 SPG21Q9NZD8 308 aa20.99■□□□□ 0.95
CCDC78-204ENST00000439619 WRAP73Q9P2S5 460 aaPredicted RBP20.99■□□□□ 0.95
CCDC78-204ENST00000439619 LAMTOR4Q0VGL1 99 aa20.98■□□□□ 0.95
CCDC78-204ENST00000439619 MXD4Q14582 209 aaPredicted RBP20.98■□□□□ 0.95
CCDC78-204ENST00000439619 CLUL1Q15846 466 aa20.98■□□□□ 0.95
CCDC78-204ENST00000439619 ZNF598Q86UK7 904 aaKnown RBP20.98■□□□□ 0.95
CCDC78-204ENST00000439619 CCDC83Q8IWF9 413 aa20.98■□□□□ 0.95
CCDC78-204ENST00000439619 NGRNQ9NPE2 291 aaKnown RBP20.98■□□□□ 0.95
CCDC78-204ENST00000439619 ENTPD7Q9NQZ7 604 aa20.98■□□□□ 0.95
CCDC78-204ENST00000439619 EVPLQ92817 2033 aa20.97■□□□□ 0.95
CCDC78-204ENST00000439619 SLITRK3O94933 977 aa20.97■□□□□ 0.95
CCDC78-204ENST00000439619 LYPLA2O95372 231 aa20.97■□□□□ 0.95
CCDC78-204ENST00000439619 ALADP13716 330 aa20.97■□□□□ 0.95
CCDC78-204ENST00000439619 ATP2B1P20020 1258 aa20.97■□□□□ 0.95
CCDC78-204ENST00000439619 GTF2F1P35269 517 aaKnown RBP eCLIP20.97■□□□□ 0.95
CCDC78-204ENST00000439619 TFDP1Q14186 410 aa20.97■□□□□ 0.95
CCDC78-204ENST00000439619 PCBP1Q15365 356 aaKnown RBP eCLIP20.97■□□□□ 0.95
CCDC78-204ENST00000439619 SMAD2Q15796 467 aaKnown RBP20.97■□□□□ 0.95
CCDC78-204ENST00000439619 CLLU1OSQ5K130 101 aa20.97■□□□□ 0.95
CCDC78-204ENST00000439619 ADGRD2Q7Z7M1 963 aa20.97■□□□□ 0.95
CCDC78-204ENST00000439619 ADHFE1Q8IWW8 467 aa20.97■□□□□ 0.95
CCDC78-204ENST00000439619 ZNF579Q8NAF0 562 aaKnown RBP20.97■□□□□ 0.95
CCDC78-204ENST00000439619 TCF25Q9BQ70 676 aa20.97■□□□□ 0.95
CCDC78-204ENST00000439619 IFT122Q9HBG6 1241 aa20.97■□□□□ 0.95
CCDC78-204ENST00000439619 BMP2KQ9NSY1 1161 aaPredicted RBP20.97■□□□□ 0.95
CCDC78-204ENST00000439619 ANKEF1Q9NU02 776 aa20.97■□□□□ 0.95
CCDC78-204ENST00000439619 FAM105AQ9NUU6 356 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms