RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 SWAP70Q9UH65 585 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 SUGT1Q9Y2Z0 365 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 EML1O00423 815 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 IGF2BP3O00425 579 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 FSBPO95073 299 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 GCFC2P16383 781 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 SSTR3P32745 418 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 FXR2P51116 673 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 PRAMEF18Q5VWM3 479 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 DENND2CQ68D51 928 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 RUFY4Q6ZNE9 571 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 SUPT20HQ8NEM7 779 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 PSMD1Q99460 953 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 FMO2Q99518 471 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 DDX23Q9BUQ8 820 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 CTNNAL1Q9UBT7 734 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 MCM8Q9UJA3 840 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 MYH15Q9Y2K3 1946 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 ARHGEF35A5YM69 484 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 TISP43B9A030 160 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 TLR2O60603 784 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 NEFHP12036 1026 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 NPR1P16066 1061 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 PPP1R2P41236 205 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 SLC29A2Q14542 456 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 DLGAP5Q15398 846 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 CALR3Q96L12 384 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 EIF2AK1Q9BQI3 630 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 SIK3Q9Y2K2 1263 aa10.74□□□□□ -0.69
CDC42SE1-202ENST00000439374 ABCB11O95342 1321 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 TCP11X1B4DZS4 312 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 NR3C1P04150 777 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 HARSP12081 509 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 PDIA5Q14554 519 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 C2CD6Q53TS8 623 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 FAM43BQ6ZT52 329 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 USP38Q8NB14 1042 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 DNAJC19Q96DA6 116 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 CCDC17Q96LX7 622 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 TMEM237Q96Q45 408 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 POP1Q99575 1024 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 DNAJC18Q9H819 358 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 TMBIM4Q9HC24 238 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 KDM3AQ9Y4C1 1321 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 UBR2Q8IWV8 1755 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 PGRMC1O00264 195 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 AKAP3O75969 853 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 ATP6V1G2O95670 118 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 AFPP02771 609 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 POLE2P56282 527 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 GSCP56915 257 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 JAG1P78504 1218 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 TAF11Q15544 211 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 MEA1Q16626 185 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 PREPLQ4J6C6 727 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 LRRC55Q6ZSA7 311 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 ERICH1Q86X53 443 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 CCDC105Q8IYK2 499 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 CHMP6Q96FZ7 201 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 BTBD6Q96KE9 485 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 TMEM39BQ9GZU3 492 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 ARHGEF10LQ9HCE6 1279 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 ALG13Q9NP73 1137 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 FZD1Q9UP38 647 aa10.73□□□□□ -0.69
CDC42SE1-202ENST00000439374 MSH4O15457 936 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 SERPING1P05155 500 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 EIF2AK2P19525 551 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 RPL13P26373 211 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 MESDQ14696 234 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 CYP4F22Q6NT55 531 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 VSIG1Q86XK7 387 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 FAM186BQ8IYM0 893 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 SPDYE1Q8NFV5 336 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 CRAMP1Q96RY5 1269 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 ZNF577Q9BSK1 485 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 GLIS2Q9BZE0 524 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 SEMA4AQ9H3S1 761 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 ECT2Q9H8V3 914 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 ACP6Q9NPH0 428 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 METTL5Q9NRN9 209 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 PRR12Q9ULL5 1215 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 USP20Q9Y2K6 914 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 hCG_2014768A0A024R1R8 64 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 A0A1W2PRG0 241 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 TESPA1A2RU30 521 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 CALUO43852 315 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 STAT2P52630 851 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 ELF3P78545 371 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 KNOP1Q1ED39 458 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 SLFN12Q8IYM2 578 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 FBXO25Q8TCJ0 367 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 MASTLQ96GX5 879 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 XPO6Q96QU8 1125 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 P2RX7Q99572 595 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 CPSF2Q9P2I0 782 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 FAM198AQ9UFP1 575 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 FRMD4BQ9Y2L6 1034 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 BCL9LQ86UU0 1499 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 K7ENM7 598 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 TNFAIP3P21580 790 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms