RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 GAS7O60861 476 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 PPFIA3O75145 1194 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 DXOO77932 396 aaKnown RBP8.77□□□□□ -1.01
VPS50-204ENST00000438395 ATG7O95352 703 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 ITGB1P05556 798 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 CYP3A4P08684 503 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 FAM86B2P0C5J1 330 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 LAG3P18627 525 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 CDC27P30260 824 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 ADD1P35611 737 aaKnown RBP8.77□□□□□ -1.01
VPS50-204ENST00000438395 NRIP1P48552 1158 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 CRYBB1P53674 252 aaPredicted RBP8.77□□□□□ -1.01
VPS50-204ENST00000438395 COL19A1Q14993 1142 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 Q6ZUG5 572 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 KIAA0319LQ8IZA0 1049 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 KLHL23Q8NBE8 558 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 RNF169Q8NCN4 708 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 POF1BQ8WVV4 589 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 SLC26A6Q9BXS9 759 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 ZMYND12Q9H0C1 365 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 TLE6Q9H808 572 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 PUF60Q9UHX1 559 aaKnown RBP8.77□□□□□ -1.01
VPS50-204ENST00000438395 ST3GAL5Q9UNP4 418 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 NOC2LQ9Y3T9 749 aaKnown RBP8.77□□□□□ -1.01
VPS50-204ENST00000438395 PCDHA10Q9Y5I2 948 aa8.77□□□□□ -1.01
VPS50-204ENST00000438395 IGLV3-22A0A075B6J6 115 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 IGKV6D-21A0A0A0MT36 114 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 PRPF3O43395 683 aaKnown RBP8.76□□□□□ -1.01
VPS50-204ENST00000438395 CHMP2AO43633 222 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 TBX10O75333 385 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 CD2BP2O95400 341 aaKnown RBP8.76□□□□□ -1.01
VPS50-204ENST00000438395 C22orf31O95567 290 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 VTNP04004 478 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 ZSCAN20P17040 1043 aaPredicted RBP8.76□□□□□ -1.01
VPS50-204ENST00000438395 PPM1AP35813 382 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 CLK2P49760 499 aaKnown RBP8.76□□□□□ -1.01
VPS50-204ENST00000438395 GATMP50440 423 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 JAK3P52333 1124 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 NLRP5P59047 1200 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 UBE3AQ05086 875 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 SMAD2Q15796 467 aaKnown RBP8.76□□□□□ -1.01
VPS50-204ENST00000438395 CTC1Q2NKJ3 1217 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 CPLX2Q6PUV4 134 aaKnown RBP8.76□□□□□ -1.01
VPS50-204ENST00000438395 RBM23Q86U06 439 aaKnown RBP8.76□□□□□ -1.01
VPS50-204ENST00000438395 SKAP1Q86WV1 359 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 EFHBQ8N7U6 833 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 TMEM87AQ8NBN3 555 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 PHKBQ93100 1093 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 OSMRQ99650 979 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 TEKT3Q9BXF9 490 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 RNF26Q9BY78 433 aaPredicted RBP8.76□□□□□ -1.01
VPS50-204ENST00000438395 C22orf23Q9BZE7 217 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 ERVK-5Q9HDB9 667 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 ENTPD7Q9NQZ7 604 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 TLR9Q9NR96 1032 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 NRBP2Q9NSY0 501 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 TMEM161AQ9NX61 479 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 GABBR1Q9UBS5 961 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 DOCK5Q9H7D0 1870 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 KAT6AQ92794 2004 aa8.76□□□□□ -1.01
VPS50-204ENST00000438395 LINC01565O15544 149 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 DHX15O43143 795 aaKnown RBP8.75□□□□□ -1.01
VPS50-204ENST00000438395 ZBTB24O43167 697 aaPredicted RBP8.75□□□□□ -1.01
VPS50-204ENST00000438395 MBTPS2O43462 519 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 FGF18O76093 207 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 LINC00271P0C7V0 271 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 CPA1P15085 419 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 RPS6KB1P23443 525 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 SFNP31947 248 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 CA8P35219 290 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 GTF2F1P35269 517 aaKnown RBP eCLIP8.75□□□□□ -1.01
VPS50-204ENST00000438395 LTBRP36941 435 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 DNM2P50570 870 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 CLCN3P51790 818 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 PRKCEQ02156 737 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 TBC1D8BQ0IIM8 1120 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 BMS1Q14692 1282 aaKnown RBP8.75□□□□□ -1.01
VPS50-204ENST00000438395 LRCH2Q5VUJ6 765 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 PDE12Q6L8Q7 609 aaKnown RBP8.75□□□□□ -1.01
VPS50-204ENST00000438395 RTN4RL1Q86UN2 441 aaPredicted RBP8.75□□□□□ -1.01
VPS50-204ENST00000438395 LRRC43Q8N309 656 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 SPPL3Q8TCT6 385 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 RASGRP4Q8TDF6 673 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 CCDC136Q96JN2 1154 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 ZNF558Q96NG5 402 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 RIT2Q99578 217 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 TMEM117Q9H0C3 514 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 TMX1Q9H3N1 280 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 C11orf16Q9NQ32 467 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 DISC1Q9NRI5 854 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 RGS18Q9NS28 235 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 VPS54Q9P1Q0 977 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 MAFBQ9Y5Q3 323 aaPredicted RBP8.75□□□□□ -1.01
VPS50-204ENST00000438395 SNX14Q9Y5W7 946 aa8.75□□□□□ -1.01
VPS50-204ENST00000438395 NID2Q14112 1375 aa8.74□□□□□ -1.01
VPS50-204ENST00000438395 ZBTB42B2RXF5 422 aa8.74□□□□□ -1.01
VPS50-204ENST00000438395 C9IYK1 514 aa8.74□□□□□ -1.01
VPS50-204ENST00000438395 MGEA5O60502 916 aa8.74□□□□□ -1.01
VPS50-204ENST00000438395 FGFR1P11362 822 aa8.74□□□□□ -1.01
VPS50-204ENST00000438395 IFNAR1P17181 557 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms