RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 GLYCTKQ8IVS8 523 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 U2AF1L4Q8WU68 220 aaKnown RBP10.33□□□□□ -0.76
CUX1-206ENST00000437600 KRT12Q99456 494 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 TUBB2BQ9BVA1 445 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 KIFC3Q9BVG8 833 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 OSGEPQ9NPF4 335 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 FAM153AQ9UHL3 310 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 ATP8B1O43520 1251 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 ZBED4O75132 1171 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 CLSTN1O94985 981 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 CELF2O95319 508 aaKnown RBP10.33□□□□□ -0.76
CUX1-206ENST00000437600 CARSP49589 748 aaKnown RBP10.33□□□□□ -0.76
CUX1-206ENST00000437600 MKRN4PQ13434 485 aaPredicted RBP10.33□□□□□ -0.76
CUX1-206ENST00000437600 NAA35Q5VZE5 725 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 EPM2AIP1Q7L775 607 aaPredicted RBP10.33□□□□□ -0.76
CUX1-206ENST00000437600 PALB2Q86YC2 1186 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 MXRA8Q9BRK3 442 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 TSGA10Q9BZW7 698 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 FAM204AQ9H8W3 233 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 PARVGQ9HBI0 331 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 FEZ2Q9UHY8 353 aaPredicted RBP10.33□□□□□ -0.76
CUX1-206ENST00000437600 TRAF3IP3Q9Y228 551 aa10.33□□□□□ -0.76
CUX1-206ENST00000437600 DCAF8L1A6NGE4 600 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 HIP1RO75146 1068 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 CALCAP01258 141 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 COPB2P35606 906 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 USP8P40818 1118 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 PAFAH1B1P43034 410 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 HSD17B4P51659 736 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 GUCY2DQ02846 1103 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 MTMR1Q13613 665 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 TMEM132BQ14DG7 1078 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 KCTD16Q68DU8 428 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 IQCEQ6IPM2 695 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 WDR93Q6P2C0 686 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 ZNF720Q7Z2F6 126 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 DDX42Q86XP3 938 aaKnown RBP eCLIP10.32□□□□□ -0.76
CUX1-206ENST00000437600 FAM186BQ8IYM0 893 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
CUX1-206ENST00000437600 SLC5A5Q92911 643 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 R3HDMLQ9H3Y0 253 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 EPB41L5Q9HCM4 733 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 NFU1Q9UMS0 254 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 PPP2R3BQ9Y5P8 575 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 ZC3H4Q9UPT8 1303 aaKnown RBP10.32□□□□□ -0.76
CUX1-206ENST00000437600 GRID2IPA4D2P6 1211 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 POTEB2H3BUK9 544 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 PDXKO00764 312 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 CALUO43852 315 aaPredicted RBP10.32□□□□□ -0.76
CUX1-206ENST00000437600 EXOC3O60645 756 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 RNF40O75150 1001 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 LCA5LO95447 670 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 EPB41P11171 864 aaKnown RBP10.32□□□□□ -0.76
CUX1-206ENST00000437600 NF2P35240 595 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 IREB2P48200 963 aaKnown RBP10.32□□□□□ -0.76
CUX1-206ENST00000437600 GRM1Q13255 1194 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 EPHA7Q15375 998 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 EDRF1Q3B7T1 1238 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 TKFCQ3LXA3 575 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 ARHGEF16Q5VV41 709 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 GADL1Q6ZQY3 521 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 OPTNQ96CV9 577 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 POP1Q99575 1024 aaKnown RBP10.32□□□□□ -0.76
CUX1-206ENST00000437600 TYW1Q9NV66 732 aaKnown RBP10.32□□□□□ -0.76
CUX1-206ENST00000437600 TAS2R14Q9NYV8 317 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 NAGPAQ9UK23 515 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 HPCAL4Q9UM19 191 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 AFG3L2Q9Y4W6 797 aa10.32□□□□□ -0.76
CUX1-206ENST00000437600 SSU72P8A0A1W2PR75 194 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 ANO9A1A5B4 782 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 AGPSO00116 658 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 PLA2G6O60733 806 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 GNA14O95837 355 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 GJA5P36382 358 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 CKAP4Q07065 602 aaKnown RBP10.31□□□□□ -0.76
CUX1-206ENST00000437600 TRAF1Q13077 416 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 PGM5Q15124 567 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 NAB2Q15742 525 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 PLA2G4FQ68DD2 849 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 MIER3Q7Z3K6 550 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 DAW1Q8N136 415 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 TSEN2Q8NCE0 465 aaKnown RBP10.31□□□□□ -0.76
CUX1-206ENST00000437600 FIZ1Q96SL8 496 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 CBWD1Q9BRT8 395 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 TEKT3Q9BXF9 490 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 TSPYL1Q9H0U9 437 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 SIX2Q9NPC8 291 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 AIPL1Q9NZN9 384 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 CEP104O60308 925 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 FSTL1Q12841 308 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 MCTP2Q6DN12 878 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 ZNF746Q6NUN9 644 aaPredicted RBP10.31□□□□□ -0.76
CUX1-206ENST00000437600 KAT5Q92993 513 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 POLR3CQ9BUI4 534 aaPredicted RBP10.31□□□□□ -0.76
CUX1-206ENST00000437600 EHMT1Q9H9B1 1298 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 ARHGEF35A5YM69 484 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 DDX3XO00571 662 aaKnown RBP eCLIP10.31□□□□□ -0.761e-8■■□□□ 13.3
CUX1-206ENST00000437600 EVI5O60447 810 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 KRT14P02533 472 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 GCLMP48507 274 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms