RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 DHX15O43143 795 aaKnown RBP20.22■□□□□ 0.83
CLK1-205ENST00000434813 P4HBP07237 508 aaKnown RBP20.22■□□□□ 0.83
CLK1-205ENST00000434813 TRIM49P0CI25 452 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 TRIM49CP0CI26 452 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 LMNB1P20700 586 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 RASA3Q14644 834 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 PRPF38AQ8NAV1 312 aaKnown RBP20.22■□□□□ 0.83
CLK1-205ENST00000434813 ACTRT1Q8TDG2 376 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 LMBR1Q8WVP7 490 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 LPAR1Q92633 364 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 KRT12Q99456 494 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 GPR88Q9GZN0 384 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 UBIAD1Q9Y5Z9 338 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 K7ENM7 598 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 DRAP1Q14919 205 aaPredicted RBP20.22■□□□□ 0.83
CLK1-205ENST00000434813 ALS2CLQ60I27 953 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 PCNX4Q63HM2 1172 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 SYCP3Q8IZU3 236 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 SYCE1Q8N0S2 351 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 U2AF1L4Q8WU68 220 aaKnown RBP20.22■□□□□ 0.83
CLK1-205ENST00000434813 AGO4Q9HCK5 861 aaKnown RBP20.22■□□□□ 0.83
CLK1-205ENST00000434813 LARSQ9P2J5 1176 aaKnown RBP20.22■□□□□ 0.83
CLK1-205ENST00000434813 PHF20L1A8MW92 1017 aa20.21■□□□□ 0.83
CLK1-205ENST00000434813 EXOC3O60645 756 aa20.21■□□□□ 0.83
CLK1-205ENST00000434813 GUCY2DQ02846 1103 aa20.21■□□□□ 0.83
CLK1-205ENST00000434813 ITGB3BPQ13352 177 aaPredicted RBP20.21■□□□□ 0.83
CLK1-205ENST00000434813 TKFCQ3LXA3 575 aa20.21■□□□□ 0.83
CLK1-205ENST00000434813 DNAAF5Q86Y56 855 aa20.21■□□□□ 0.83
CLK1-205ENST00000434813 TSEN2Q8NCE0 465 aaKnown RBP20.21■□□□□ 0.83
CLK1-205ENST00000434813 CALR3Q96L12 384 aaKnown RBP20.21■□□□□ 0.83
CLK1-205ENST00000434813 GOLPH3Q9H4A6 298 aa20.21■□□□□ 0.83
CLK1-205ENST00000434813 TMEM206Q9H813 350 aa20.21■□□□□ 0.83
CLK1-205ENST00000434813 EPB41L5Q9HCM4 733 aa20.21■□□□□ 0.83
CLK1-205ENST00000434813 CWC15Q9P013 229 aaKnown RBP20.21■□□□□ 0.83
CLK1-205ENST00000434813 SUCLA2Q9P2R7 463 aaPredicted RBP20.21■□□□□ 0.83
CLK1-205ENST00000434813 CNOT7Q9UIV1 285 aaKnown RBP20.21■□□□□ 0.83
CLK1-205ENST00000434813 ZHX2Q9Y6X8 837 aa20.21■□□□□ 0.83
CLK1-205ENST00000434813 LYPLA2O95372 231 aa20.2■□□□□ 0.83
CLK1-205ENST00000434813 EGFRP00533 1210 aa20.2■□□□□ 0.83
CLK1-205ENST00000434813 CCDC172P0C7W6 258 aa20.2■□□□□ 0.83
CLK1-205ENST00000434813 CARSP49589 748 aaKnown RBP20.2■□□□□ 0.83
CLK1-205ENST00000434813 C12orf56Q8IXR9 622 aa20.2■□□□□ 0.83
CLK1-205ENST00000434813 PKD2L1Q9P0L9 805 aa20.2■□□□□ 0.83
CLK1-205ENST00000434813 STXBP5LQ9Y2K9 1186 aa20.2■□□□□ 0.83
CLK1-205ENST00000434813 GOLGA6CA6NDK9 693 aa20.2■□□□□ 0.82
CLK1-205ENST00000434813 ZSCAN5CA6NGD5 496 aaPredicted RBP20.2■□□□□ 0.82
CLK1-205ENST00000434813 GOLGA8KD6RF30 607 aa20.2■□□□□ 0.82
CLK1-205ENST00000434813 PGRMC1O00264 195 aaKnown RBP20.2■□□□□ 0.82
CLK1-205ENST00000434813 TMEM253P0C7T8 217 aa20.2■□□□□ 0.82
CLK1-205ENST00000434813 GOLGA6DP0CG33 693 aa20.2■□□□□ 0.82
CLK1-205ENST00000434813 RARRES1P49788 294 aa20.2■□□□□ 0.82
CLK1-205ENST00000434813 TBC1D10BQ4KMP7 808 aaPredicted RBP20.2■□□□□ 0.82
CLK1-205ENST00000434813 SAMD7Q7Z3H4 446 aa20.2■□□□□ 0.82
CLK1-205ENST00000434813 PEX26Q7Z412 305 aa20.2■□□□□ 0.82
CLK1-205ENST00000434813 GLYCTKQ8IVS8 523 aa20.2■□□□□ 0.82
CLK1-205ENST00000434813 MREGQ8N565 214 aa20.2■□□□□ 0.82
CLK1-205ENST00000434813 FAM76AQ8TAV0 307 aa20.2■□□□□ 0.82
CLK1-205ENST00000434813 SCFD2Q8WU76 684 aa20.2■□□□□ 0.82
CLK1-205ENST00000434813 GOLGA6AQ9NYA3 693 aa20.2■□□□□ 0.82
CLK1-205ENST00000434813 MAP3K20Q9NYL2 800 aaKnown RBP20.2■□□□□ 0.82
CLK1-205ENST00000434813 RAD51CO43502 376 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 OPA1O60313 960 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 HSF2BPO75031 334 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 IVLP07476 585 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 GALCP54803 685 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 INTS8Q75QN2 995 aaKnown RBP20.19■□□□□ 0.82
CLK1-205ENST00000434813 SAMD3Q8N6K7 520 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 KIAA1683Q9H0B3 1180 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 SLC38A10Q9HBR0 1119 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 NFU1Q9UMS0 254 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 SCAF8Q9UPN6 1271 aaKnown RBP20.19■□□□□ 0.82
CLK1-205ENST00000434813 CEP104O60308 925 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 KRT13P13646 458 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 QARSP47897 775 aaKnown RBP20.19■□□□□ 0.82
CLK1-205ENST00000434813 MRPS9P82933 396 aaKnown RBP20.19■□□□□ 0.82
CLK1-205ENST00000434813 PPFIA1Q13136 1202 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 MTMR1Q13613 665 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 METTL13Q8N6R0 699 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 EIF1ADQ8N9N8 165 aaKnown RBP20.19■□□□□ 0.82
CLK1-205ENST00000434813 LMO3Q8TAP4 145 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 SYTL5Q8TDW5 730 aaPredicted RBP20.19■□□□□ 0.82
CLK1-205ENST00000434813 CASKIN2Q8WXE0 1202 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.19■□□□□ 0.826e-7■■■■■ 27.3
CLK1-205ENST00000434813 RFFLQ8WZ73 363 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 ACCSQ96QU6 501 aa20.19■□□□□ 0.82
CLK1-205ENST00000434813 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.19■□□□□ 0.828e-10■■□□□ 13.9
CLK1-205ENST00000434813 ESYT3A0FGR9 886 aa20.18■□□□□ 0.82
CLK1-205ENST00000434813 PLS3P13797 630 aa20.18■□□□□ 0.82
CLK1-205ENST00000434813 RNASE9P60153 205 aaKnown RBP20.18■□□□□ 0.82
CLK1-205ENST00000434813 KIF22Q14807 665 aa20.18■□□□□ 0.82
CLK1-205ENST00000434813 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.18■□□□□ 0.82
CLK1-205ENST00000434813 NT5DC3Q86UY8 548 aa20.18■□□□□ 0.82
CLK1-205ENST00000434813 RASGEF1CQ8N431 466 aa20.18■□□□□ 0.82
CLK1-205ENST00000434813 WHAMMQ8TF30 809 aa20.18■□□□□ 0.82
CLK1-205ENST00000434813 TIPINQ9BVW5 301 aa20.18■□□□□ 0.82
CLK1-205ENST00000434813 ST6GALNAC4Q9H4F1 302 aa20.18■□□□□ 0.82
CLK1-205ENST00000434813 TBC1D22BQ9NU19 505 aa20.18■□□□□ 0.82
CLK1-205ENST00000434813 NOC2LQ9Y3T9 749 aaKnown RBP20.18■□□□□ 0.82
CLK1-205ENST00000434813 P4HA2O15460 535 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 SHOX2O60902 331 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms