RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 REXO2Q9Y3B8 237 aaKnown RBP5.81□□□□□ -1.48
PTPN4-205ENST00000433888 PTPDC1A2A3K4 754 aa5.8□□□□□ -1.48
PTPN4-205ENST00000433888 B4E1Z4 1266 aa5.8□□□□□ -1.48
PTPN4-205ENST00000433888 ASLP04424 464 aa5.8□□□□□ -1.48
PTPN4-205ENST00000433888 VSIG10L2P0DP72 767 aa5.8□□□□□ -1.48
PTPN4-205ENST00000433888 MAN2A2P49641 1150 aa5.8□□□□□ -1.48
PTPN4-205ENST00000433888 NANOS3P60323 173 aaKnown RBP5.8□□□□□ -1.48
PTPN4-205ENST00000433888 EPHA7Q15375 998 aa5.8□□□□□ -1.48
PTPN4-205ENST00000433888 CREB3L3Q68CJ9 461 aa5.8□□□□□ -1.48
PTPN4-205ENST00000433888 RPUSD2Q8IZ73 545 aaKnown RBP5.8□□□□□ -1.48
PTPN4-205ENST00000433888 DYDC2Q96IM9 177 aa5.8□□□□□ -1.48
PTPN4-205ENST00000433888 WDR92Q96MX6 357 aa5.8□□□□□ -1.48
PTPN4-205ENST00000433888 TNPO3Q9Y5L0 923 aaKnown RBP5.8□□□□□ -1.48
PTPN4-205ENST00000433888 POLR2AP24928 1970 aaKnown RBP5.79□□□□□ -1.48
PTPN4-205ENST00000433888 GRXCR1A8MXD5 290 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 FOXN1O15353 648 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 TOX4O94842 621 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 HNRNPLP14866 589 aaKnown RBP eCLIP5.79□□□□□ -1.483e-7■■□□□ 13.1
PTPN4-205ENST00000433888 BCAR1P56945 870 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 SQSTM1Q13501 440 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 CNGB1Q14028 1251 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-205ENST00000433888 ZNF460Q14592 562 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 FKBP15Q5T1M5 1219 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 MRGPREQ86SM8 312 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 GSPT2Q8IYD1 628 aaKnown RBP5.79□□□□□ -1.48
PTPN4-205ENST00000433888 KIAA1958Q8N8K9 716 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 TUBGCP5Q96RT8 1024 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 MNTQ99583 582 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 PITHD1Q9GZP4 211 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-205ENST00000433888 POLR3BQ9NW08 1133 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-205ENST00000433888 B4GALT6Q9UBX8 382 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 TRPS1Q9UHF7 1281 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 DNAI1Q9UI46 699 aa5.79□□□□□ -1.48
PTPN4-205ENST00000433888 A0A0A6YYJ9 748 aa5.78□□□□□ -1.48
PTPN4-205ENST00000433888 A0A0A6YYK5 440 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-205ENST00000433888 GOLGA8BA8MQT2 603 aa5.78□□□□□ -1.48
PTPN4-205ENST00000433888 TGM1P22735 817 aa5.78□□□□□ -1.48
PTPN4-205ENST00000433888 KIR2DL3P43628 341 aa5.78□□□□□ -1.48
PTPN4-205ENST00000433888 ESRP1Q6NXG1 681 aaKnown RBP5.78□□□□□ -1.48
PTPN4-205ENST00000433888 ZNF662Q6ZS27 426 aa5.78□□□□□ -1.48
PTPN4-205ENST00000433888 RHOUQ7L0Q8 258 aa5.78□□□□□ -1.48
PTPN4-205ENST00000433888 NME9Q86XW9 330 aa5.78□□□□□ -1.48
PTPN4-205ENST00000433888 PMFBP1Q8TBY8 1022 aa5.78□□□□□ -1.48
PTPN4-205ENST00000433888 SOX7Q9BT81 388 aa5.78□□□□□ -1.48
PTPN4-205ENST00000433888 GPR87Q9BY21 358 aa5.78□□□□□ -1.48
PTPN4-205ENST00000433888 H7C1D1 291 aa5.77□□□□□ -1.49
PTPN4-205ENST00000433888 CBX4O00257 560 aa5.77□□□□□ -1.49
PTPN4-205ENST00000433888 RPS6KA4O75676 772 aa5.77□□□□□ -1.49
PTPN4-205ENST00000433888 JUNP05412 331 aaKnown RBP5.77□□□□□ -1.49
PTPN4-205ENST00000433888 SDSP20132 328 aa5.77□□□□□ -1.49
PTPN4-205ENST00000433888 SMAD3P84022 425 aaKnown RBP5.77□□□□□ -1.49
PTPN4-205ENST00000433888 PRAMEF9Q5VWM5 478 aa5.77□□□□□ -1.49
PTPN4-205ENST00000433888 NAIF1Q69YI7 327 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-205ENST00000433888 ELOA2Q8IYF1 753 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-205ENST00000433888 CMTM4Q8IZR5 234 aa5.77□□□□□ -1.49
PTPN4-205ENST00000433888 MDGA1Q8NFP4 955 aa5.77□□□□□ -1.49
PTPN4-205ENST00000433888 PPP1R14CQ8TAE6 165 aa5.77□□□□□ -1.49
PTPN4-205ENST00000433888 ZNF512Q96ME7 567 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-205ENST00000433888 ELF4Q99607 663 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-205ENST00000433888 TTPALQ9BTX7 342 aa5.77□□□□□ -1.49
PTPN4-205ENST00000433888 OSBPL6Q9BZF3 934 aa5.77□□□□□ -1.49
PTPN4-205ENST00000433888 ENKD1Q9H0I2 346 aa5.77□□□□□ -1.49
PTPN4-205ENST00000433888 MTSS1O43312 755 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 OPA1O60313 960 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 RAMP2O60895 175 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 SLC9A1P19634 815 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 NR4A1P22736 598 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 ZNF174Q15697 407 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 RABL3Q5HYI8 236 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 PIK3R6Q5UE93 754 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 MFSD5Q6N075 450 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 UNQ6494/PRO21346Q6UXR6 183 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 DNAJC10Q8IXB1 793 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 LENG9Q96B70 501 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 PCIF1Q9H4Z3 704 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 NRDE2Q9H7Z3 1164 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 KANSL2Q9H9L4 492 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 CABP5Q9NP86 173 aa5.76□□□□□ -1.49
PTPN4-205ENST00000433888 COL4A3Q01955 1670 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 DAPK3O43293 454 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 FAM20BO75063 409 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 MFAP3LO75121 409 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 STC2O76061 302 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 PRPF6O94906 941 aaKnown RBP5.75□□□□□ -1.49
PTPN4-205ENST00000433888 PROZP22891 400 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 PTGS2P35354 604 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 ADCY1Q08828 1119 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 SPIDRQ14159 915 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 CDCA2Q69YH5 1023 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-205ENST00000433888 LAIR1Q6GTX8 287 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 SLC25A43Q8WUT9 341 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-205ENST00000433888 ATXN2LQ8WWM7 1075 aaKnown RBP5.75□□□□□ -1.49
PTPN4-205ENST00000433888 RPGRQ92834 1020 aaKnown RBP5.75□□□□□ -1.49
PTPN4-205ENST00000433888 HAS1Q92839 578 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 ZG16BQ96DA0 208 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 ORAI3Q9BRQ5 295 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 RCAN3Q9UKA8 241 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 CDK11AQ9UQ88 783 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-205ENST00000433888 SPO11Q9Y5K1 396 aa5.75□□□□□ -1.49
PTPN4-205ENST00000433888 TMEM191CA6NGB0 347 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms