RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 TRIOO75962 3097 aa18.17■□□□□ 0.5
ACTB-205ENST00000432588 MUC6Q6W4X9 2439 aa18.17■□□□□ 0.5
ACTB-205ENST00000432588 IGKV6-21A0A0C4DH24 114 aa18.17■□□□□ 0.5
ACTB-205ENST00000432588 GCFC2P16383 781 aaKnown RBP18.17■□□□□ 0.5
ACTB-205ENST00000432588 DRP2Q13474 957 aa18.17■□□□□ 0.5
ACTB-205ENST00000432588 BMS1Q14692 1282 aaKnown RBP18.17■□□□□ 0.5
ACTB-205ENST00000432588 CLLU1OSQ5K130 101 aa18.17■□□□□ 0.5
ACTB-205ENST00000432588 TMC7Q7Z402 723 aa18.17■□□□□ 0.5
ACTB-205ENST00000432588 FAM20AQ96MK3 541 aa18.17■□□□□ 0.5
ACTB-205ENST00000432588 PHF7Q9BWX1 381 aaPredicted RBP18.17■□□□□ 0.5
ACTB-205ENST00000432588 SUCLA2Q9P2R7 463 aaPredicted RBP18.17■□□□□ 0.5
ACTB-205ENST00000432588 KCNJ14Q9UNX9 436 aa18.17■□□□□ 0.5
ACTB-205ENST00000432588 A0A087WZ62 844 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 TMEM150BA6NC51 233 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 MAFO75444 373 aaPredicted RBP18.16■□□□□ 0.5
ACTB-205ENST00000432588 CSDE1O75534 798 aaKnown RBP18.16■□□□□ 0.5
ACTB-205ENST00000432588 STBD1O95210 358 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 SKIP12755 728 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 ATF7P17544 494 aaPredicted RBP18.16■□□□□ 0.5
ACTB-205ENST00000432588 HOXD11P31277 338 aaPredicted RBP18.16■□□□□ 0.5
ACTB-205ENST00000432588 PBX3P40426 434 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 QARSP47897 775 aaKnown RBP18.16■□□□□ 0.5
ACTB-205ENST00000432588 ALDH7A1P49419 539 aaKnown RBP18.16■□□□□ 0.5
ACTB-205ENST00000432588 PPP2R5CQ13362 524 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 TWF2Q6IBS0 349 aaKnown RBP18.16■□□□□ 0.5
ACTB-205ENST00000432588 PPP4R3AQ6IN85 833 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 TMEM184AQ6ZMB5 413 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 NEK8Q86SG6 692 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 ZNF598Q86UK7 904 aaKnown RBP18.16■□□□□ 0.5
ACTB-205ENST00000432588 RHPN2Q8IUC4 686 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 EXOC8Q8IYI6 725 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 VN1R2Q8NFZ6 395 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 HELQQ8TDG4 1101 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 CEP89Q96ST8 783 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 NAP1L4Q99733 375 aaKnown RBP18.16■□□□□ 0.5
ACTB-205ENST00000432588 SH2D3AQ9BRG2 576 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 FDXACB1Q9BRP7 624 aaPredicted RBP18.16■□□□□ 0.5
ACTB-205ENST00000432588 PHF20Q9BVI0 1012 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 STK36Q9NRP7 1315 aa18.16■□□□□ 0.5
ACTB-205ENST00000432588 CARNS1A5YM72 827 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 LOC730098B7Z3J9 87 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 SLC37A4O43826 429 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 MARCH6O60337 910 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 NEFLP07196 543 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 RBM10P98175 930 aaKnown RBP18.15■□□□□ 0.5
ACTB-205ENST00000432588 SCRN1Q12765 414 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 ANO5Q75V66 913 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 SLC7A3Q8WY07 619 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 EDAQ92838 391 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 MFSD14AQ96MC6 490 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 NLRP4Q96MN2 994 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 TRAIPQ9BWF2 469 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 KCNMB3Q9NPA1 279 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 CYP26B1Q9NR63 512 aa18.15■□□□□ 0.5
ACTB-205ENST00000432588 PIN4Q9Y237 131 aaKnown RBP18.15■□□□□ 0.5
ACTB-205ENST00000432588 P4HBP07237 508 aaKnown RBP18.14■□□□□ 0.49
ACTB-205ENST00000432588 HOXB8P17481 243 aaPredicted RBP18.14■□□□□ 0.49
ACTB-205ENST00000432588 TECP42680 631 aa18.14■□□□□ 0.49
ACTB-205ENST00000432588 PHKA2P46019 1235 aa18.14■□□□□ 0.49
ACTB-205ENST00000432588 SMC1AQ14683 1233 aaKnown RBP18.14■□□□□ 0.49
ACTB-205ENST00000432588 CBX2Q14781 532 aaPredicted RBP18.14■□□□□ 0.49
ACTB-205ENST00000432588 GLB1LQ6UWU2 654 aa18.14■□□□□ 0.49
ACTB-205ENST00000432588 CATSPER4Q7RTX7 472 aa18.14■□□□□ 0.49
ACTB-205ENST00000432588 SLC39A11Q8N1S5 342 aa18.14■□□□□ 0.49
ACTB-205ENST00000432588 SUSD6Q92537 303 aa18.14■□□□□ 0.49
ACTB-205ENST00000432588 RPGRIP1Q96KN7 1286 aa18.14■□□□□ 0.49
ACTB-205ENST00000432588 KCNH6Q9H252 994 aa18.14■□□□□ 0.49
ACTB-205ENST00000432588 VAV3Q9UKW4 847 aa18.14■□□□□ 0.49
ACTB-205ENST00000432588 PPME1Q9Y570 386 aa18.14■□□□□ 0.49
ACTB-205ENST00000432588 PIEZO1Q92508 2521 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 HIDE1A8MVS5 230 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 EML1O00423 815 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 TBX3O15119 743 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 CCNT1O60563 726 aaKnown RBP18.13■□□□□ 0.49
ACTB-205ENST00000432588 PFKFB2O60825 505 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 RAB27AP51159 221 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 POLGP54098 1239 aaPredicted RBP18.13■□□□□ 0.49
ACTB-205ENST00000432588 BCAR1P56945 870 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 KCNC3Q14003 757 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 ANKRD1Q15327 319 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 PLA2G4FQ68DD2 849 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 ANKRD54Q6NXT1 300 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 LLGL2Q6P1M3 1020 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 PIK3AP1Q6ZUJ8 805 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 HFE2Q6ZVN8 426 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 WASF1Q92558 559 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 TMEM169Q96HH4 297 aa18.13■□□□□ 0.49
ACTB-205ENST00000432588 ZC3H11AO75152 810 aaKnown RBP eCLIP18.12■□□□□ 0.49
ACTB-205ENST00000432588 CA8P35219 290 aa18.12■□□□□ 0.49
ACTB-205ENST00000432588 RFC5P40937 340 aa18.12■□□□□ 0.49
ACTB-205ENST00000432588 TPRNQ4KMQ1 711 aa18.12■□□□□ 0.49
ACTB-205ENST00000432588 KSR1Q8IVT5 923 aa18.12■□□□□ 0.49
ACTB-205ENST00000432588 MRPL43Q8N983 215 aaKnown RBP18.12■□□□□ 0.49
ACTB-205ENST00000432588 TMEM87AQ8NBN3 555 aa18.12■□□□□ 0.49
ACTB-205ENST00000432588 PSPC1Q8WXF1 523 aaKnown RBP18.12■□□□□ 0.49
ACTB-205ENST00000432588 CASP10Q92851 521 aa18.12■□□□□ 0.49
ACTB-205ENST00000432588 CEP170P1Q96L14 293 aa18.12■□□□□ 0.49
ACTB-205ENST00000432588 FAM105AQ9NUU6 356 aa18.12■□□□□ 0.49
ACTB-205ENST00000432588 COL4A3BPQ9Y5P4 624 aa18.12■□□□□ 0.49
ACTB-205ENST00000432588 GAS2O43903 313 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms