RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 POLR3FQ9H1D9 316 aaPredicted RBP29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 NHEJ1Q9H9Q4 299 aaPredicted RBP29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 PLCB1Q9NQ66 1216 aa29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 REXO2Q9Y3B8 237 aaKnown RBP29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 GTPBP10A4D1E9 387 aaKnown RBP29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 TISP43B9A030 160 aa29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 CYLC1P35663 651 aaPredicted RBP29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 STAT5BP51692 787 aa29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 POLGP54098 1239 aaPredicted RBP29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 PPP2R5AQ15172 486 aa29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 DPY19L2P1Q6NXN4 242 aa29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 PTPN18Q99952 460 aa29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 NUCKS1Q9H1E3 243 aaKnown RBP29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 DHX33Q9H6R0 707 aaKnown RBP29.1■■■□□ 2.25
SH3GL3-202ENST00000427482 A0A0U1RQJ8 604 aa29.09■■■□□ 2.25
SH3GL3-202ENST00000427482 DENND3A2RUS2 1198 aa29.09■■■□□ 2.25
SH3GL3-202ENST00000427482 ADORA2AP29274 412 aa29.09■■■□□ 2.25
SH3GL3-202ENST00000427482 EXOC3L4Q17RC7 722 aa29.09■■■□□ 2.25
SH3GL3-202ENST00000427482 ARMCX2Q7L311 632 aa29.09■■■□□ 2.25
SH3GL3-202ENST00000427482 ATRIPQ8WXE1 791 aa29.09■■■□□ 2.25
SH3GL3-202ENST00000427482 GPR20Q99678 358 aa29.09■■■□□ 2.25
SH3GL3-202ENST00000427482 DNAI1Q9UI46 699 aa29.09■■■□□ 2.25
SH3GL3-202ENST00000427482 ITGBL1O95965 494 aaPredicted RBP29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 POLR2FP61218 127 aaKnown RBP29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 GBP6Q6ZN66 633 aa29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 IFT74Q96LB3 600 aa29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 CBWD1Q9BRT8 395 aa29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 NLRC4Q9NPP4 1024 aa29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 LZTFL1Q9NQ48 299 aa29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 NRBP2Q9NSY0 501 aa29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 STRNO43815 780 aa29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 PON1P27169 355 aa29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 APBA1Q02410 837 aa29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 TARBP2Q15633 366 aaKnown RBP29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 SYN2Q92777 582 aaPredicted RBP29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 HSPBP1Q9NZL4 362 aa29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 ADGRA3Q8IWK6 1321 aa29.08■■■□□ 2.25
SH3GL3-202ENST00000427482 LGR5O75473 907 aa29.07■■■□□ 2.24
SH3GL3-202ENST00000427482 SLC9A1P19634 815 aa29.07■■■□□ 2.24
SH3GL3-202ENST00000427482 GTF2F1P35269 517 aaKnown RBP eCLIP29.07■■■□□ 2.24
SH3GL3-202ENST00000427482 PCIF1Q9H4Z3 704 aa29.07■■■□□ 2.24
SH3GL3-202ENST00000427482 ARHGAP20Q9P2F6 1191 aa29.07■■■□□ 2.24
SH3GL3-202ENST00000427482 EIF3CLB5ME19 914 aaKnown RBP29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 FANCGO15287 622 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 RFC5P40937 340 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 GNG11P61952 73 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 BFSP1Q12934 665 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 TTLL4Q14679 1199 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 HSDL1Q3SXM5 330 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 XXYLT1Q8NBI6 393 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 FAM167AQ96KS9 214 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 EIF3CQ99613 913 aaKnown RBP29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 AZI2Q9H6S1 392 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 ARHGAP28Q9P2N2 729 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 KCNG1Q9UIX4 513 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 IVNS1ABPQ9Y6Y0 642 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 H0YCG3 227 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 NOP56O00567 594 aaKnown RBP29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 MAPK13O15264 365 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 TXNP10599 105 aaKnown RBP29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 ARHGAP25P42331 645 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 FMO5P49326 533 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 HUNKP57058 714 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 DHX37Q8IY37 1157 aaKnown RBP29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 SCFD2Q8WU76 684 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 PDGFCQ9NRA1 345 aa29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 DIS3Q9Y2L1 958 aaKnown RBP29.06■■■□□ 2.24
SH3GL3-202ENST00000427482 ZNF236Q9UL36 1845 aa29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 PLEKP08567 350 aaPredicted RBP29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 ACTN1P12814 892 aa29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 ABCD1P33897 745 aa29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 KRT83P78385 493 aa29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 FAM110CQ1W6H9 321 aa29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 ARHGAP29Q52LW3 1261 aa29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 KLHDC7AQ5VTJ3 777 aa29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 INTS8Q75QN2 995 aaKnown RBP29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 ZNF467Q7Z7K2 595 aaPredicted RBP29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 SLC7A3Q8WY07 619 aa29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 GCNT4Q9P109 453 aa29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 PPME1Q9Y570 386 aa29.05■■■□□ 2.24
SH3GL3-202ENST00000427482 ANKRD63C9JTQ0 380 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 SFMBT2Q5VUG0 894 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 CHADLQ6NUI6 762 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 RDH13Q8NBN7 331 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 COPS5Q92905 334 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 KCNN1Q92952 543 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 TMEM143Q96AN5 459 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 CCDC42Q96M95 316 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 SPATA33Q96N06 139 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 WDR24Q96S15 920 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 SIX2Q9NPC8 291 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 EMSYQ7Z589 1322 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 TRIM49P0CI25 452 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 TRIM49CP0CI26 452 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 KRT13P13646 458 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 ARL2P36404 184 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 GPR142Q7Z601 462 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 FBXL5Q9UKA1 691 aa29.04■■■□□ 2.24
SH3GL3-202ENST00000427482 UCHL3P15374 230 aa29.03■■■□□ 2.24
SH3GL3-202ENST00000427482 CNGA1P29973 690 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms