RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 GTF2F1P35269 517 aaKnown RBP eCLIP11.37□□□□□ -0.59
COMMD1-202ENST00000427417 TXKP42681 527 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 FOSBP53539 338 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 NPEPPSP55786 919 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 CYP4A11Q02928 519 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 SPIRE1Q08AE8 756 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 ORC2Q13416 577 aaPredicted RBP11.37□□□□□ -0.59
COMMD1-202ENST00000427417 GNL2Q13823 731 aaKnown RBP11.37□□□□□ -0.59
COMMD1-202ENST00000427417 COL19A1Q14993 1142 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 C8orf34Q49A92 452 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 TPH2Q8IWU9 490 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 THNSL1Q8IYQ7 743 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 LRRC43Q8N309 656 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 SPPL3Q8TCT6 385 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 POF1BQ8WVV4 589 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 NLRP4Q96MN2 994 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 CCDC43Q96MW1 224 aaKnown RBP11.37□□□□□ -0.59
COMMD1-202ENST00000427417 TRAIPQ9BWF2 469 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 FOXP1Q9H334 677 aaPredicted RBP11.37□□□□□ -0.59
COMMD1-202ENST00000427417 DHX33Q9H6R0 707 aaKnown RBP11.37□□□□□ -0.59
COMMD1-202ENST00000427417 UPF2Q9HAU5 1272 aaKnown RBP11.37□□□□□ -0.59
COMMD1-202ENST00000427417 TYW1Q9NV66 732 aaKnown RBP11.37□□□□□ -0.59
COMMD1-202ENST00000427417 CLDND1Q9NY35 253 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 RGL1Q9NZL6 768 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 WRAP73Q9P2S5 460 aaPredicted RBP11.37□□□□□ -0.59
COMMD1-202ENST00000427417 COL4A3BPQ9Y5P4 624 aa11.37□□□□□ -0.59
COMMD1-202ENST00000427417 FNDC1Q4ZHG4 1894 aaPredicted RBP11.37□□□□□ -0.59
COMMD1-202ENST00000427417 PLXNA4Q9HCM2 1894 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 FSD2A1L4K1 749 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 CARNS1A5YM72 827 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 ST18O60284 1047 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 SLITRK3O94933 977 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 LYPLA2O95372 231 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 FGFR4P22455 802 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 DNAJB1P25685 340 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 IRS1P35568 1242 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 PPM1AP35813 382 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 RBM25P49756 843 aaKnown RBP11.36□□□□□ -0.59
COMMD1-202ENST00000427417 GUCY1B3Q02153 619 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 ST3GAL1Q11201 340 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 HYAL1Q12794 435 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 CAMK1Q14012 370 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 CTTNQ14247 550 aaKnown RBP11.36□□□□□ -0.59
COMMD1-202ENST00000427417 CLUL1Q15846 466 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 XKR9Q5GH70 373 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 TWF2Q6IBS0 349 aaKnown RBP11.36□□□□□ -0.59
COMMD1-202ENST00000427417 PTCRAQ6ISU1 281 aaPredicted RBP11.36□□□□□ -0.59
COMMD1-202ENST00000427417 PDE12Q6L8Q7 609 aaKnown RBP11.36□□□□□ -0.59
COMMD1-202ENST00000427417 CATSPER4Q7RTX7 472 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 SRGAP1Q7Z6B7 1085 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 COLGALT1Q8NBJ5 622 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 RNF169Q8NCN4 708 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 CASD1Q96PB1 797 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 MTMR9Q96QG7 549 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 MTRQ99707 1265 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 EIF2AK1Q9BQI3 630 aaKnown RBP11.36□□□□□ -0.59
COMMD1-202ENST00000427417 MRPL9Q9BYD2 267 aaKnown RBP11.36□□□□□ -0.59
COMMD1-202ENST00000427417 EPHX3Q9H6B9 360 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 PUF60Q9UHX1 559 aaKnown RBP11.36□□□□□ -0.59
COMMD1-202ENST00000427417 PIN4Q9Y237 131 aaKnown RBP11.36□□□□□ -0.59
COMMD1-202ENST00000427417 PCDHGC5Q9Y5F6 944 aa11.36□□□□□ -0.59
COMMD1-202ENST00000427417 GRXCR2A6NFK2 248 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 LINC01565O15544 149 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 CSDE1O75534 798 aaKnown RBP11.35□□□□□ -0.59
COMMD1-202ENST00000427417 DGAT1O75907 488 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 FGF18O76093 207 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 MCM7P33993 719 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 PHKA2P46019 1235 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 RAB27AP51159 221 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 DLX2Q07687 328 aaPredicted RBP11.35□□□□□ -0.59
COMMD1-202ENST00000427417 LAMTOR4Q0VGL1 99 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 MXD4Q14582 209 aaPredicted RBP11.35□□□□□ -0.59
COMMD1-202ENST00000427417 EMC2Q15006 297 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 RABEP1Q15276 862 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 PCBP1Q15365 356 aaKnown RBP eCLIP11.35□□□□□ -0.59
COMMD1-202ENST00000427417 CTC1Q2NKJ3 1217 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 ADGRD2Q7Z7M1 963 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 ZNF598Q86UK7 904 aaKnown RBP11.35□□□□□ -0.59
COMMD1-202ENST00000427417 KSR1Q8IVT5 923 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 FBXO18Q8NFZ0 1043 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 MICAL1Q8TDZ2 1067 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 PRPF31Q8WWY3 499 aaKnown RBP11.35□□□□□ -0.59
COMMD1-202ENST00000427417 TMEM143Q96AN5 459 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 PGBD4Q96DM1 585 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 ZNF558Q96NG5 402 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 HSD17B14Q9BPX1 270 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 IGFLR1Q9H665 355 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 CWH43Q9H720 699 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 IFT122Q9HBG6 1241 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 TLR9Q9NR96 1032 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 ANKEF1Q9NU02 776 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 NOL7Q9UMY1 257 aaKnown RBP11.35□□□□□ -0.59
COMMD1-202ENST00000427417 LZTS1Q9Y250 596 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 KIF3AQ9Y496 699 aa11.35□□□□□ -0.59
COMMD1-202ENST00000427417 TBX10O75333 385 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 SRGAP2CP0DJJ0 459 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 XRCC6P12956 609 aaKnown RBP eCLIP11.34□□□□□ -0.59
COMMD1-202ENST00000427417 ATP2B1P20020 1258 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 COL9A1P20849 921 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 LTBRP36941 435 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms