RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 C8orf34Q49A92 452 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 MIER3Q7Z3K6 550 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 NEK8Q86SG6 692 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 KIAA2013Q8IYS2 634 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 NME8Q8N427 588 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 OXER1Q8TDS5 423 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 NAP1L4Q99733 375 aaKnown RBP14.31□□□□□ -0.12
SGCE-203ENST00000425444 SLC37A4O43826 429 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 CCNT1O60563 726 aaKnown RBP14.3□□□□□ -0.12
SGCE-203ENST00000425444 JAK2O60674 1132 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 PSMD10O75832 226 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 OATP04181 439 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 FDPSP14324 419 aaKnown RBP14.3□□□□□ -0.12
SGCE-203ENST00000425444 GCFC2P16383 781 aaKnown RBP14.3□□□□□ -0.12
SGCE-203ENST00000425444 CD52P31358 61 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 PUM1Q14671 1186 aaKnown RBP eCLIP14.3□□□□□ -0.12
SGCE-203ENST00000425444 METTL13Q8N6R0 699 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 VN1R2Q8NFZ6 395 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 ETNPPLQ8TBG4 499 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 MBOAT7Q96N66 472 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 APOL5Q9BWW9 433 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 CELF4Q9BZC1 486 aaKnown RBP14.3□□□□□ -0.12
SGCE-203ENST00000425444 NRBP2Q9NSY0 501 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 LIMCH1Q9UPQ0 1083 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 NR2E1Q9Y466 385 aa14.3□□□□□ -0.12
SGCE-203ENST00000425444 C22orf31O95567 290 aa14.29□□□□□ -0.12
SGCE-203ENST00000425444 CLCN5P51795 746 aa14.29□□□□□ -0.12
SGCE-203ENST00000425444 NR5A1Q13285 461 aa14.29□□□□□ -0.12
SGCE-203ENST00000425444 UGCGQ16739 394 aa14.29□□□□□ -0.12
SGCE-203ENST00000425444 PAN2Q504Q3 1202 aaKnown RBP14.29□□□□□ -0.12
SGCE-203ENST00000425444 CCDC83Q8IWF9 413 aa14.29□□□□□ -0.12
SGCE-203ENST00000425444 CMTR2Q8IYT2 770 aaKnown RBP14.29□□□□□ -0.12
SGCE-203ENST00000425444 RDM1Q8NG50 284 aa14.29□□□□□ -0.12
SGCE-203ENST00000425444 PPP1R16BQ96T49 567 aa14.29□□□□□ -0.12
SGCE-203ENST00000425444 SMOC2Q9H3U7 446 aa14.29□□□□□ -0.12
SGCE-203ENST00000425444 AGO3Q9H9G7 860 aaKnown RBP14.29□□□□□ -0.12
SGCE-203ENST00000425444 KIAA1671Q9BY89 1806 aa14.29□□□□□ -0.12
SGCE-203ENST00000425444 FAM208BQ5VWN6 2430 aa14.29□□□□□ -0.12
SGCE-203ENST00000425444 FSD2A1L4K1 749 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 ZBTB42B2RXF5 422 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 MAGEB2O15479 319 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 ZNF862O60290 1169 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 LMNAP02545 664 aaKnown RBP14.28□□□□□ -0.12
SGCE-203ENST00000425444 SRGAP2BP0DMP2 458 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 TECP42680 631 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 DUSP6Q16828 381 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 PPP4R3AQ6IN85 833 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 DIS3L2Q8IYB7 885 aaKnown RBP14.28□□□□□ -0.12
SGCE-203ENST00000425444 FLCNQ8NFG4 579 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 MAP7D2Q96T17 732 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 CDCA3Q99618 268 aaPredicted RBP14.28□□□□□ -0.12
SGCE-203ENST00000425444 FTHL17Q9BXU8 183 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 S1PR5Q9H228 398 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 UPF2Q9HAU5 1272 aaKnown RBP14.28□□□□□ -0.12
SGCE-203ENST00000425444 SEPT9Q9UHD8 586 aaPredicted RBP14.28□□□□□ -0.12
SGCE-203ENST00000425444 PADI3Q9ULW8 664 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 AKT3Q9Y243 479 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 SQORQ9Y6N5 450 aa14.28□□□□□ -0.12
SGCE-203ENST00000425444 KDM3AQ9Y4C1 1321 aa14.27□□□□□ -0.12
SGCE-203ENST00000425444 RPS6KA5O75582 802 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 VTNP04004 478 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 IBSPP21815 317 aaPredicted RBP14.27□□□□□ -0.13
SGCE-203ENST00000425444 TMOD1P28289 359 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 CLCN3P51790 818 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 TBC1D8BQ0IIM8 1120 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 ST3GAL1Q11201 340 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 NFX1Q12986 1120 aaKnown RBP14.27□□□□□ -0.13
SGCE-203ENST00000425444 ANGPT1Q15389 498 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 KIZQ2M2Z5 673 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 TMEM266Q2M3C6 531 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 EARS2Q5JPH6 523 aaKnown RBP14.27□□□□□ -0.13
SGCE-203ENST00000425444 POTEDQ86YR6 584 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 KIAA0319LQ8IZA0 1049 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 HINFPQ9BQA5 517 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 KCNMB3Q9NPA1 279 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 FASNP49327 2511 aaKnown RBP14.27□□□□□ -0.13
SGCE-203ENST00000425444 MYH9P35579 1960 aaKnown RBP14.27□□□□□ -0.13
SGCE-203ENST00000425444 PLXNA4Q9HCM2 1894 aa14.27□□□□□ -0.13
SGCE-203ENST00000425444 FAM205CA6NFA0 338 aa14.26□□□□□ -0.13
SGCE-203ENST00000425444 C2CD4DB7Z1M9 353 aa14.26□□□□□ -0.13
SGCE-203ENST00000425444 BAG4O95429 457 aaKnown RBP14.26□□□□□ -0.13
SGCE-203ENST00000425444 GUCY1B3Q02153 619 aa14.26□□□□□ -0.13
SGCE-203ENST00000425444 SAFBQ15424 915 aaKnown RBP eCLIP14.26□□□□□ -0.13
SGCE-203ENST00000425444 MTERF2Q49AM1 385 aa14.26□□□□□ -0.13
SGCE-203ENST00000425444 XKR3Q5GH77 459 aa14.26□□□□□ -0.13
SGCE-203ENST00000425444 ODR4Q5SWX8 454 aa14.26□□□□□ -0.13
SGCE-203ENST00000425444 EFCAB12Q6NXP0 572 aa14.26□□□□□ -0.13
SGCE-203ENST00000425444 ANKRD54Q6NXT1 300 aa14.26□□□□□ -0.13
SGCE-203ENST00000425444 LRRC71Q8N4P6 559 aa14.26□□□□□ -0.13
SGCE-203ENST00000425444 ZSCAN31Q96LW9 406 aaPredicted RBP14.26□□□□□ -0.13
SGCE-203ENST00000425444 FAM20AQ96MK3 541 aa14.26□□□□□ -0.13
SGCE-203ENST00000425444 SCLT1Q96NL6 688 aa14.26□□□□□ -0.13
SGCE-203ENST00000425444 OSMRQ99650 979 aa14.26□□□□□ -0.13
SGCE-203ENST00000425444 SH2B1Q9NRF2 756 aaPredicted RBP14.26□□□□□ -0.13
SGCE-203ENST00000425444 BTBD18B2RXH4 712 aa14.25□□□□□ -0.13
SGCE-203ENST00000425444 TBX3O15119 743 aa14.25□□□□□ -0.13
SGCE-203ENST00000425444 DKC1O60832 514 aaKnown RBP eCLIP14.25□□□□□ -0.13
SGCE-203ENST00000425444 ASGR2P07307 311 aa14.25□□□□□ -0.13
SGCE-203ENST00000425444 CRYBB1P53674 252 aaPredicted RBP14.25□□□□□ -0.13
SGCE-203ENST00000425444 PPP2R5CQ13362 524 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms