RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 DUSP12Q9UNI6 340 aa18.96■□□□□ 0.63
CHCHD3-202ENST00000423635 V9GY48 417 aaPredicted RBP18.96■□□□□ 0.63
CHCHD3-202ENST00000423635 WDR87Q6ZQQ6 2873 aa18.96■□□□□ 0.63
CHCHD3-202ENST00000423635 ZNF292O60281 2723 aa18.95■□□□□ 0.62
CHCHD3-202ENST00000423635 TMC5Q6UXY8 1006 aa18.95■□□□□ 0.62
CHCHD3-202ENST00000423635 TRMT1LQ7Z2T5 733 aaKnown RBP18.95■□□□□ 0.62
CHCHD3-202ENST00000423635 CABP7Q86V35 215 aa18.95■□□□□ 0.62
CHCHD3-202ENST00000423635 TMEM173Q86WV6 379 aaPredicted RBP18.95■□□□□ 0.62
CHCHD3-202ENST00000423635 FEZF2Q8TBJ5 459 aa18.95■□□□□ 0.62
CHCHD3-202ENST00000423635 AUTS2Q8WXX7 1259 aa18.95■□□□□ 0.62
CHCHD3-202ENST00000423635 IGSF21Q96ID5 467 aa18.95■□□□□ 0.62
CHCHD3-202ENST00000423635 FAM167AQ96KS9 214 aa18.95■□□□□ 0.62
CHCHD3-202ENST00000423635 KCNK12Q9HB15 430 aa18.95■□□□□ 0.62
CHCHD3-202ENST00000423635 GABBR1Q9UBS5 961 aa18.95■□□□□ 0.62
CHCHD3-202ENST00000423635 MYH9P35579 1960 aaKnown RBP18.95■□□□□ 0.62
CHCHD3-202ENST00000423635 SYNE3Q6ZMZ3 975 aa18.94■□□□□ 0.62
CHCHD3-202ENST00000423635 CCDC149Q6ZUS6 474 aa18.94■□□□□ 0.62
CHCHD3-202ENST00000423635 LRRC71Q8N4P6 559 aa18.94■□□□□ 0.62
CHCHD3-202ENST00000423635 LRRC2Q9BYS8 371 aa18.94■□□□□ 0.62
CHCHD3-202ENST00000423635 SFXN1Q9H9B4 322 aa18.94■□□□□ 0.62
CHCHD3-202ENST00000423635 SLC27A2O14975 620 aa18.93■□□□□ 0.62
CHCHD3-202ENST00000423635 GALTP07902 379 aa18.93■□□□□ 0.62
CHCHD3-202ENST00000423635 PHKA2P46019 1235 aa18.93■□□□□ 0.62
CHCHD3-202ENST00000423635 SETQ01105 290 aaPredicted RBP18.93■□□□□ 0.62
CHCHD3-202ENST00000423635 C15orf39Q6ZRI6 1047 aa18.93■□□□□ 0.62
CHCHD3-202ENST00000423635 EXOC6Q8TAG9 804 aa18.93■□□□□ 0.62
CHCHD3-202ENST00000423635 LSG1Q9H089 658 aaKnown RBP18.93■□□□□ 0.62
CHCHD3-202ENST00000423635 NRDE2Q9H7Z3 1164 aa18.93■□□□□ 0.62
CHCHD3-202ENST00000423635 NRBP2Q9NSY0 501 aa18.93■□□□□ 0.62
CHCHD3-202ENST00000423635 IGSF9Q9P2J2 1179 aa18.93■□□□□ 0.62
CHCHD3-202ENST00000423635 DENND4AQ7Z401 1863 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 EP300Q09472 2414 aaPredicted RBP18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 DNAH14Q0VDD8 3507 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 ZNF862O60290 1169 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 ZC3H11AO75152 810 aaKnown RBP eCLIP18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 FGFR4P22455 802 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 CDC42EP1Q00587 391 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 NECTIN1Q15223 517 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 JAKMIP3Q5VZ66 844 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 APOA5Q6Q788 366 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 SIX5Q8N196 739 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 ZNF668Q96K58 619 aaPredicted RBP18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 WNT16Q9UBV4 365 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 STK39Q9UEW8 545 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 FBXL21Q9UKT6 434 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 DMXL1Q9Y485 3027 aa18.92■□□□□ 0.62
CHCHD3-202ENST00000423635 LMNAP02545 664 aaKnown RBP18.91■□□□□ 0.62
CHCHD3-202ENST00000423635 OATP04181 439 aa18.91■□□□□ 0.62
CHCHD3-202ENST00000423635 SKIP12755 728 aa18.91■□□□□ 0.62
CHCHD3-202ENST00000423635 CLCN4P51793 760 aa18.91■□□□□ 0.62
CHCHD3-202ENST00000423635 PTPN14Q15678 1187 aa18.91■□□□□ 0.62
CHCHD3-202ENST00000423635 LETM2Q2VYF4 491 aa18.91■□□□□ 0.62
CHCHD3-202ENST00000423635 BCL7CQ8WUZ0 217 aaPredicted RBP18.91■□□□□ 0.62
CHCHD3-202ENST00000423635 RMDN1Q96DB5 314 aa18.91■□□□□ 0.62
CHCHD3-202ENST00000423635 KLHL5Q96PQ7 755 aa18.91■□□□□ 0.62
CHCHD3-202ENST00000423635 TBC1D13Q9NVG8 400 aa18.91■□□□□ 0.62
CHCHD3-202ENST00000423635 SAMM50Q9Y512 469 aa18.91■□□□□ 0.62
CHCHD3-202ENST00000423635 LILRB3O75022 631 aa18.9■□□□□ 0.62
CHCHD3-202ENST00000423635 ZNF623O75123 536 aa18.9■□□□□ 0.62
CHCHD3-202ENST00000423635 CIITAP33076 1130 aa18.9■□□□□ 0.62
CHCHD3-202ENST00000423635 TARBP2Q15633 366 aaKnown RBP18.9■□□□□ 0.62
CHCHD3-202ENST00000423635 RTN1Q16799 776 aa18.9■□□□□ 0.62
CHCHD3-202ENST00000423635 CREB3L3Q68CJ9 461 aa18.9■□□□□ 0.62
CHCHD3-202ENST00000423635 NLRP7Q8WX94 980 aa18.9■□□□□ 0.62
CHCHD3-202ENST00000423635 VN1R3Q9BXE9 311 aa18.9■□□□□ 0.62
CHCHD3-202ENST00000423635 EMILIN2Q9BXX0 1053 aa18.9■□□□□ 0.62
CHCHD3-202ENST00000423635 GCOM2Q9BZD3 368 aaPredicted RBP18.9■□□□□ 0.62
CHCHD3-202ENST00000423635 TCEAL9Q9UHQ7 104 aa18.9■□□□□ 0.62
CHCHD3-202ENST00000423635 WDR64B1ANS9 1081 aa18.89■□□□□ 0.61
CHCHD3-202ENST00000423635 CSDE1O75534 798 aaKnown RBP18.89■□□□□ 0.61
CHCHD3-202ENST00000423635 OFD1O75665 1012 aa18.89■□□□□ 0.61
CHCHD3-202ENST00000423635 NOMO2Q5JPE7 1267 aa18.89■□□□□ 0.61
CHCHD3-202ENST00000423635 GLB1LQ6UWU2 654 aa18.89■□□□□ 0.61
CHCHD3-202ENST00000423635 CMASQ8NFW8 434 aaPredicted RBP18.89■□□□□ 0.61
CHCHD3-202ENST00000423635 SCLT1Q96NL6 688 aa18.89■□□□□ 0.61
CHCHD3-202ENST00000423635 RHOBTB2Q9BYZ6 727 aa18.89■□□□□ 0.61
CHCHD3-202ENST00000423635 ZMYND12Q9H0C1 365 aa18.89■□□□□ 0.61
CHCHD3-202ENST00000423635 DISC1Q9NRI5 854 aa18.89■□□□□ 0.61
CHCHD3-202ENST00000423635 FAM217BQ9NTX9 383 aaPredicted RBP18.89■□□□□ 0.61
CHCHD3-202ENST00000423635 BRPF3Q9ULD4 1205 aa18.89■□□□□ 0.61
CHCHD3-202ENST00000423635 ESYT2A0FGR8 921 aa18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 KRBA1A5PL33 1030 aa18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 CNPP09543 421 aaKnown RBP18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 KLRC2P26717 231 aa18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 SLC11A1P49279 550 aa18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 EXOSC10Q01780 885 aaKnown RBP18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 TBC1D8BQ0IIM8 1120 aa18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 PFKFB3Q16875 520 aaPredicted RBP18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 PRR16Q569H4 304 aa18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 CYP26C1Q6V0L0 522 aa18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 KCNG4Q8TDN1 519 aa18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 LPPQ93052 612 aa18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 LENG9Q96B70 501 aa18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 DNAJB4Q9UDY4 337 aa18.88■□□□□ 0.61
CHCHD3-202ENST00000423635 MED19A0JLT2 244 aaPredicted RBP18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 ADAMTS3O15072 1205 aa18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 ZBTB43O43298 467 aa18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 NARSO43776 548 aaKnown RBP18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 N4BP1O75113 896 aaKnown RBP18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 PRKCEQ02156 737 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms