RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 EYA4O95677 639 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 MAP2K2P36507 400 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 MKRN4PQ13434 485 aaPredicted RBP16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 CRY2Q49AN0 593 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 TRMT1LQ7Z2T5 733 aaKnown RBP16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 KIAA0825Q8IV33 1275 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 FAM20AQ96MK3 541 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 SCLT1Q96NL6 688 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 NCAPGQ9BPX3 1015 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 STK33Q9BYT3 514 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 INTUQ9ULD6 942 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 NHSQ6T4R5 1651 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 LOC102724159A0A0B4J2E5 919 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 SMTNP53814 917 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 PWP2Q15269 919 aaKnown RBP16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 DENND2CQ68D51 928 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 ZNF746Q6NUN9 644 aaPredicted RBP16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 FAM178BQ8IXR5 827 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 FBXO25Q8TCJ0 367 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 ALG3Q92685 438 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 DYDC2Q96IM9 177 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 CCDC17Q96LX7 622 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 ERP44Q9BS26 406 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 COL24A1Q17RW2 1714 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 EXOC3O60645 756 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 CFBP00751 764 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 TMEM253P0C7T8 217 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 PTENP60484 403 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 ATP8B4Q8TF62 1192 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 C18orf8Q96DM3 657 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 HOOK2Q96ED9 719 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 MBOAT7Q96N66 472 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 INTS2Q9H0H0 1204 aaKnown RBP16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 PARVGQ9HBI0 331 aa16.42■□□□□ 0.22
SEMA3B-203ENST00000419007 DDX3YO15523 660 aaKnown RBP16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 ANXA13P27216 316 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 PMS2P54278 862 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 NPEPPSP55786 919 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 ODR4Q5SWX8 454 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 HOOK3Q86VS8 718 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 MYCBPQ99417 103 aaPredicted RBP16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 NAP1L3Q99457 506 aaPredicted RBP16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 COA1Q9GZY4 146 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 NENFQ9UMX5 172 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 DDTLA6NHG4 134 aaPredicted RBP16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 TBX3O15119 743 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 IFNAR2P48551 515 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 MYL7Q01449 175 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 Q4G0T1 1027 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 APOBEC3HQ6NTF7 200 aaKnown RBP16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 CCDC25Q86WR0 208 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 JAMLQ86YT9 394 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 SLC30A5Q8TAD4 765 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 NEK9Q8TD19 979 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 DCAF4Q8WV16 495 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 VAV3Q9UKW4 847 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 COG5Q9UP83 839 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 PTPN22Q9Y2R2 807 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 FOXN3O00409 490 aaPredicted RBP16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 CHN1P15882 459 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 SREBF1P36956 1147 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 BMT2Q1RMZ1 405 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 MOXD1Q6UVY6 613 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 SLC20A1Q8WUM9 679 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 PCIF1Q9H4Z3 704 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 AZI2Q9H6S1 392 aa16.41■□□□□ 0.22
SEMA3B-203ENST00000419007 GTPBP10A4D1E9 387 aaKnown RBP16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 RGS16O15492 202 aaPredicted RBP16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 MMEP08473 750 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 GYS1P13807 737 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 GAP43P17677 238 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 MARCKSL1P49006 195 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 EN1Q05925 392 aaPredicted RBP16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 SLC29A2Q14542 456 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 ANKRD20A8PQ5CZ79 823 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 KIAA1755Q5JYT7 1200 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 LRCH2Q5VUJ6 765 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 TATDN2Q93075 761 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 CHMP6Q96FZ7 201 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 XPO6Q96QU8 1125 aaKnown RBP16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 CARD9Q9H257 536 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 YY1AP1Q9H869 796 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 APEX2Q9UBZ4 518 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 ALG6Q9Y672 507 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 UTRNP46939 3433 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 THSD7AQ9UPZ6 1657 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 PPFIA2O75334 1257 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 FOSP01100 380 aaPredicted RBP16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 POU5F1Q01860 360 aaKnown RBP16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 MESDQ14696 234 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 KRT35Q92764 455 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 ACTR5Q9H9F9 607 aaPredicted RBP16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 UBE2TQ9NPD8 197 aaPredicted RBP16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 OLFML3Q9NRN5 406 aa16.4■□□□□ 0.22
SEMA3B-203ENST00000419007 SRRM3A6NNA2 597 aaPredicted RBP16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 CHUKO15111 745 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 SLC26A4O43511 780 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 NDUFB10O96000 172 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 CCDC172P0C7W6 258 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms