RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 PSMD2Q13200 908 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 KCNB1Q14721 858 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 HSP90AA5PQ58FG0 334 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 CCDC137Q6PK04 289 aaKnown RBP13.82□□□□□ -0.2
SCN1B-202ENST00000415950 CASKIN2Q8WXE0 1202 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 MTMR8Q96EF0 704 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 LRGUKQ96M69 825 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 TXLNGQ9NUQ3 528 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 BAG5Q9UL15 447 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 CCPG1Q9ULG6 757 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 UTYO14607 1347 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 IQGAP1P46940 1657 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 PVALEFA0A1B0GWK0 134 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 PPFIA2O75334 1257 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 TFAMQ00059 246 aaKnown RBP13.82□□□□□ -0.2
SCN1B-202ENST00000415950 PTGISQ16647 500 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 ASPRV1Q53RT3 343 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 ARMC9Q7Z3E5 817 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 DYDC2Q96IM9 177 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 ZNF577Q9BSK1 485 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 CCSER1Q9C0I3 900 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 SAYSD1Q9NPB0 183 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 PLAGL2Q9UPG8 496 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 WTIPA6NIX2 430 aaPredicted RBP13.81□□□□□ -0.2
SCN1B-202ENST00000415950 GOLGA8RI6L899 631 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 CPP00450 1065 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 TBX2Q13207 712 aaPredicted RBP13.81□□□□□ -0.2
SCN1B-202ENST00000415950 SLMAPQ14BN4 828 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 CDKAL1Q5VV42 579 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 ECT2Q9H8V3 914 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 CD163L1Q9NR16 1453 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 H0YIN7 160 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 EEF1B2P24534 225 aaKnown RBP13.81□□□□□ -0.2
SCN1B-202ENST00000415950 TSTA3Q13630 321 aaPredicted RBP13.81□□□□□ -0.2
SCN1B-202ENST00000415950 LONP2Q86WA8 852 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 MAP7D3Q8IWC1 876 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 TSEN2Q8NCE0 465 aaKnown RBP13.81□□□□□ -0.2
SCN1B-202ENST00000415950 DTX3LQ8TDB6 740 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 ANKS1AQ92625 1134 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 SPZ1Q9BXG8 430 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 FGFR1OP2Q9NVK5 253 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 INO80B-WBP1J3KQ70 363 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 TRIM37O94972 964 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 SLC4A1P02730 911 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 CYP19A1P11511 503 aaPredicted RBP13.81□□□□□ -0.2
SCN1B-202ENST00000415950 CDC25CP30307 473 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 HSD17B3P37058 310 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 BPIFB4P59827 614 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 LMNB2Q03252 620 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 ADCY2Q08462 1091 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 GPATCH4Q5T3I0 446 aaKnown RBP13.81□□□□□ -0.2
SCN1B-202ENST00000415950 SAAL1Q96ER3 474 aa13.81□□□□□ -0.2
SCN1B-202ENST00000415950 INO80BQ9C086 356 aaPredicted RBP13.81□□□□□ -0.2
SCN1B-202ENST00000415950 PPARGC1AQ9UBK2 798 aaKnown RBP13.81□□□□□ -0.2
SCN1B-202ENST00000415950 MAP2P11137 1827 aaKnown RBP13.81□□□□□ -0.2
SCN1B-202ENST00000415950 A6NJR5 290 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 ATMINO43313 823 aaPredicted RBP13.8□□□□□ -0.2
SCN1B-202ENST00000415950 MAP3K7O43318 606 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 CDC37Q16543 378 aaPredicted RBP13.8□□□□□ -0.2
SCN1B-202ENST00000415950 KRT80Q6KB66 452 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 CCDC68Q9H2F9 335 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 ADGRB1O14514 1584 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 PDHBP11177 359 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 UCHL3P15374 230 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 SLC29A2Q14542 456 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 TRMT10CQ7L0Y3 403 aaKnown RBP13.8□□□□□ -0.2
SCN1B-202ENST00000415950 SLC30A5Q8TAD4 765 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 SKA2Q8WVK7 121 aaPredicted RBP13.8□□□□□ -0.2
SCN1B-202ENST00000415950 BSDC1Q9NW68 430 aaPredicted RBP13.8□□□□□ -0.2
SCN1B-202ENST00000415950 SETBP1Q9Y6X0 1596 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 PEX3P56589 373 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 KNOP1Q1ED39 458 aaKnown RBP13.8□□□□□ -0.2
SCN1B-202ENST00000415950 ABCB5Q2M3G0 1257 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 BRDTQ58F21 947 aaPredicted RBP13.8□□□□□ -0.2
SCN1B-202ENST00000415950 DARS2Q6PI48 645 aaKnown RBP13.8□□□□□ -0.2
SCN1B-202ENST00000415950 TRIM59Q8IWR1 403 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 TGS1Q96RS0 853 aaKnown RBP13.8□□□□□ -0.2
SCN1B-202ENST00000415950 TSC22D3Q99576 134 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 CNOT8Q9UFF9 292 aaKnown RBP13.8□□□□□ -0.2
SCN1B-202ENST00000415950 SEPT9Q9UHD8 586 aaPredicted RBP13.8□□□□□ -0.2
SCN1B-202ENST00000415950 RAB21Q9UL25 225 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 MAP2K7O14733 419 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 FAM107AO95990 144 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 FOSP01100 380 aaPredicted RBP13.8□□□□□ -0.2
SCN1B-202ENST00000415950 RWDD2BP57060 319 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 DNAJC24Q6P3W2 148 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 PYROXD1Q8WU10 500 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 REREQ9P2R6 1566 aa13.8□□□□□ -0.2
SCN1B-202ENST00000415950 FAM205AQ6ZU69 1335 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 ERVV-1B6SEH8 477 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 PLS3P13797 630 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 RAD23BP54727 409 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 FAM47CQ5HY64 1035 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 CEP70Q8NHQ1 597 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 SDCCAG3Q96C92 435 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 NSUN4Q96CB9 384 aaKnown RBP13.79□□□□□ -0.2
SCN1B-202ENST00000415950 OSBPL1AQ9BXW6 950 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 PDS5AQ29RF7 1337 aaKnown RBP13.79□□□□□ -0.2
SCN1B-202ENST00000415950 PNMA6FA0A0J9YX94 578 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 RCCD1A6NED2 376 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms