RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 DNAJB2P25686 324 aa16.22■□□□□ 0.19
LIMS1-206ENST00000414829 FXR1P51114 621 aaKnown RBP eCLIP16.22■□□□□ 0.19
LIMS1-206ENST00000414829 DNM1Q05193 864 aaKnown RBP16.22■□□□□ 0.19
LIMS1-206ENST00000414829 DMP1Q13316 513 aaPredicted RBP16.22■□□□□ 0.19
LIMS1-206ENST00000414829 FAM109BQ6ICB4 259 aaPredicted RBP16.22■□□□□ 0.19
LIMS1-206ENST00000414829 IFNLR1Q8IU57 520 aaPredicted RBP16.22■□□□□ 0.19
LIMS1-206ENST00000414829 NPAS4Q8IUM7 802 aa16.22■□□□□ 0.19
LIMS1-206ENST00000414829 TIFAQ96CG3 184 aa16.22■□□□□ 0.19
LIMS1-206ENST00000414829 TFIP11Q9UBB9 837 aaKnown RBP16.22■□□□□ 0.19
LIMS1-206ENST00000414829 LRRIQ4A6NIV6 560 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 E9PMD0 336 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 HOXA2O43364 376 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 TLL1O43897 1013 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 PLA2G4BP0C869 781 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 SRGAP2CP0DJJ0 459 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 AXLP30530 894 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 ABCD1P33897 745 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 RAB27AP51159 221 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 EFNA5P52803 228 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 PTENP60484 403 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 KARSQ15046 597 aaKnown RBP16.21■□□□□ 0.19
LIMS1-206ENST00000414829 FOXD4L6Q3SYB3 417 aaPredicted RBP16.21■□□□□ 0.19
LIMS1-206ENST00000414829 ZNF697Q5TEC3 545 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 RRAGBQ5VZM2 374 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 FOXD4L3Q6VB84 417 aaPredicted RBP16.21■□□□□ 0.19
LIMS1-206ENST00000414829 SLC24A5Q71RS6 500 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 CATSPER4Q7RTX7 472 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 DEPTORQ8TB45 409 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 LARP4BQ92615 738 aaKnown RBP16.21■□□□□ 0.19
LIMS1-206ENST00000414829 RAD54LQ92698 747 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 CCDC51Q96ER9 411 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 SPATA32Q96LK8 384 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 PNMA5Q96PV4 448 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 YME1L1Q96TA2 773 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 RAD9AQ99638 391 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 CUEDC2Q9H467 287 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 CDHR5Q9HBB8 845 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 IFT122Q9HBG6 1241 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 FAM13BQ9NYF5 915 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 ODF2LQ9ULJ1 636 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 INSL6Q9Y581 213 aa16.21■□□□□ 0.19
LIMS1-206ENST00000414829 TRIP12Q14669 1992 aaPredicted RBP16.2■□□□□ 0.18
LIMS1-206ENST00000414829 H0YCG3 227 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 INO80B-WBP1J3KQ70 363 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 GLRA2P23416 452 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 STAT6P42226 847 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 SARSP49591 514 aaKnown RBP16.2■□□□□ 0.18
LIMS1-206ENST00000414829 SLC12A3P55017 1021 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 DEFB103AP81534 67 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 GRIN1Q05586 938 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 CAPSQ13938 189 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 CDCA2Q69YH5 1023 aaPredicted RBP16.2■□□□□ 0.18
LIMS1-206ENST00000414829 RINT1Q6NUQ1 792 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 TOP1MTQ969P6 601 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 EPSTI1Q96J88 318 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 PRIMPOLQ96LW4 560 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 CLIC6Q96NY7 704 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 ADAM2Q99965 735 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 TRAIPQ9BWF2 469 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 PBX4Q9BYU1 374 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 LRRC27Q9C0I9 530 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 ELAC1Q9H777 363 aaKnown RBP16.2■□□□□ 0.18
LIMS1-206ENST00000414829 SLC28A3Q9HAS3 691 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 MAGEF1Q9HAY2 307 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 RGS18Q9NS28 235 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 AGPAT5Q9NUQ2 364 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 LARSQ9P2J5 1176 aaKnown RBP16.2■□□□□ 0.18
LIMS1-206ENST00000414829 RCOR1Q9UKL0 485 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 LRFN2Q9ULH4 789 aa16.2■□□□□ 0.18
LIMS1-206ENST00000414829 PIN4Q9Y237 131 aaKnown RBP16.2■□□□□ 0.18
LIMS1-206ENST00000414829 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.19■□□□□ 0.18
LIMS1-206ENST00000414829 ENPP3O14638 875 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 TBCAO75347 108 aaKnown RBP16.19■□□□□ 0.18
LIMS1-206ENST00000414829 KRT18P05783 430 aaKnown RBP16.19■□□□□ 0.18
LIMS1-206ENST00000414829 DDIT3P35638 169 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 SMTNP53814 917 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 MAPK6Q16659 721 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 CSPP1Q1MSJ5 1256 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.19■□□□□ 0.18
LIMS1-206ENST00000414829 C1orf186Q6ZWK4 172 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 MAEAQ7L5Y9 396 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 KCNK18Q7Z418 384 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 APBB1IPQ7Z5R6 666 aaPredicted RBP16.19■□□□□ 0.18
LIMS1-206ENST00000414829 GPBP1Q86WP2 473 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 KSR1Q8IVT5 923 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 SLC17A8Q8NDX2 589 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 ASAP3Q8TDY4 903 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 ZNF668Q96K58 619 aaPredicted RBP16.19■□□□□ 0.18
LIMS1-206ENST00000414829 OSBPL7Q9BZF2 842 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 TMX1Q9H3N1 280 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 GPRC5CQ9NQ84 441 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 PRMT7Q9NVM4 692 aaPredicted RBP16.19■□□□□ 0.18
LIMS1-206ENST00000414829 ZDHHC9Q9Y397 364 aa16.19■□□□□ 0.18
LIMS1-206ENST00000414829 RBM19Q9Y4C8 960 aaKnown RBP16.19■□□□□ 0.18
LIMS1-206ENST00000414829 A0A087WWV3 80 aa16.18■□□□□ 0.18
LIMS1-206ENST00000414829 SOX1O00570 391 aaPredicted RBP16.18■□□□□ 0.18
LIMS1-206ENST00000414829 HIP1RO75146 1068 aa16.18■□□□□ 0.18
LIMS1-206ENST00000414829 TCTN1Q2MV58 587 aa16.18■□□□□ 0.18
LIMS1-206ENST00000414829 PPP2R2DQ66LE6 453 aa16.18■□□□□ 0.18
LIMS1-206ENST00000414829 TWF2Q6IBS0 349 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms