RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 L3MBTL3Q96JM7 780 aaPredicted RBP16.72■□□□□ 0.27
LIMS2-205ENST00000409455 TRIM51Q9BSJ1 452 aa16.72■□□□□ 0.27
LIMS2-205ENST00000409455 PABPC3Q9H361 631 aaKnown RBP16.72■□□□□ 0.27
LIMS2-205ENST00000409455 BCS1LQ9Y276 419 aa16.72■□□□□ 0.27
LIMS2-205ENST00000409455 SHBGP04278 402 aa16.72■□□□□ 0.27
LIMS2-205ENST00000409455 PMS2P54278 862 aa16.72■□□□□ 0.27
LIMS2-205ENST00000409455 IRF2BP2Q7Z5L9 587 aa16.72■□□□□ 0.27
LIMS2-205ENST00000409455 VPS36Q86VN1 386 aa16.72■□□□□ 0.27
LIMS2-205ENST00000409455 REXO1Q8N1G1 1221 aaKnown RBP16.72■□□□□ 0.27
LIMS2-205ENST00000409455 LRRC47Q8N1G4 583 aaKnown RBP16.72■□□□□ 0.27
LIMS2-205ENST00000409455 ATP8B4Q8TF62 1192 aa16.72■□□□□ 0.27
LIMS2-205ENST00000409455 MTMR9Q96QG7 549 aa16.72■□□□□ 0.27
LIMS2-205ENST00000409455 PRMT1Q99873 361 aaKnown RBP16.72■□□□□ 0.27
LIMS2-205ENST00000409455 TLDC2A0PJX2 215 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 CLRN2A0PK11 232 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 POTEMA6NI47 508 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 USP17L5A8MUK1 530 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 FGGP02679 453 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 NQO1P15559 274 aaKnown RBP16.71■□□□□ 0.27
LIMS2-205ENST00000409455 PTGER2P43116 358 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 SLFN11Q7Z7L1 901 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 CCDC134Q9H6E4 229 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 PANK4Q9NVE7 773 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 SEC63Q9UGP8 760 aaKnown RBP16.71■□□□□ 0.27
LIMS2-205ENST00000409455 HDAC9Q9UKV0 1011 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 CD2APQ9Y5K6 639 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 A0A0A6YYK5 440 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-205ENST00000409455 NFKBIEO00221 500 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 TTLL1O95922 423 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 ALADP13716 330 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 DLGAP5Q15398 846 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 PPP2R5EQ16537 467 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 SHROOM1Q2M3G4 852 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-205ENST00000409455 C11orf91Q3C1V1 193 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 CROCCP2Q86T23 111 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 NELFCDQ8IXH7 590 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 SPZ1Q9BXG8 430 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 BMP2KQ9NSY1 1161 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-205ENST00000409455 SPATS2LQ9NUQ6 558 aaKnown RBP16.71■□□□□ 0.27
LIMS2-205ENST00000409455 ABCF3Q9NUQ8 709 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 STXBP5LQ9Y2K9 1186 aa16.71■□□□□ 0.27
LIMS2-205ENST00000409455 ATP8B3O60423 1300 aa16.71■□□□□ 0.26
LIMS2-205ENST00000409455 SPDYE3A6NKU9 549 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 SMIM23A6NLE4 172 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 TCP10L2B9ZVM9 353 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 ENTPD3O75355 529 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 H2AFZP0C0S5 128 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 CCND1P24385 295 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 ANXA13P27216 316 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 DR1Q01658 176 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 KCNH2Q12809 1159 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 PDIA5Q14554 519 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 H2AFVQ71UI9 128 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 NT5DC3Q86UY8 548 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 DNAAF5Q86Y56 855 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 CCDC17Q96LX7 622 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 STMN4Q9H169 189 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-205ENST00000409455 ADAM7Q9H2U9 754 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 AZI2Q9H6S1 392 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 BIN2Q9UBW5 565 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-205ENST00000409455 AGTP01019 485 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 UCHL3P15374 230 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 PDE6CP51160 858 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 ZNF131P52739 623 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 PTENP60484 403 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 SARNPP82979 210 aaKnown RBP16.7■□□□□ 0.26
LIMS2-205ENST00000409455 POU5F1Q01860 360 aaKnown RBP16.7■□□□□ 0.26
LIMS2-205ENST00000409455 CERKLQ49MI3 558 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-205ENST00000409455 TMEM119Q4V9L6 283 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 CAPRIN2Q6IMN6 1127 aaKnown RBP16.7■□□□□ 0.26
LIMS2-205ENST00000409455 KCNK18Q7Z418 384 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 JDP2Q8WYK2 163 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 HES6Q96HZ4 224 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 UBA5Q9GZZ9 404 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 TTC7AQ9ULT0 858 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-205ENST00000409455 AGAP1Q9UPQ3 857 aa16.7■□□□□ 0.26
LIMS2-205ENST00000409455 ACTN1P12814 892 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 KCNJ2P63252 427 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 ICA1Q05084 483 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 ADCY2Q08462 1091 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 ADAM9Q13443 819 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 C6orf118Q5T5N4 469 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 GBP7Q8N8V2 638 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-205ENST00000409455 AGBL3Q8NEM8 1001 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 ZNF483Q8TF39 744 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-205ENST00000409455 DNAJC19Q96DA6 116 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 ZNF570Q96NI8 536 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 NAP1L3Q99457 506 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-205ENST00000409455 ERP44Q9BS26 406 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 EPB41L4BQ9H329 900 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 VAT1LQ9HCJ6 419 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 KCNMB3Q9NPA1 279 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 TBC1D7Q9P0N9 293 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 AMFRQ9UKV5 643 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 DAAM1Q9Y4D1 1078 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 FRMPD2Q68DX3 1309 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-205ENST00000409455 DIAPH2O60879 1101 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 UBOX5O94941 541 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 IFNAR2P48551 515 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 ALDH5A1P51649 535 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms