RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 IFT74Q96LB3 600 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 PCIF1Q9H4Z3 704 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 XPNPEP1Q9NQW7 623 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 GCNT4Q9P109 453 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 ZNF215Q9UL58 517 aaPredicted RBP20.72■□□□□ 0.91
USP39-202ENST00000409025 SLC45A1Q9Y2W3 748 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 KRT86O43790 486 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 AKR1B10O60218 316 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 GGPS1O95749 300 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 ABL1P00519 1130 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 ATP4AP20648 1035 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 FMO5P49326 533 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 BFSP1Q12934 665 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 RAPGEF1Q13905 1077 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 CCDC122Q5T0U0 273 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 FAM160B1Q5W0V3 765 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 DPY19L2P1Q6NXN4 242 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 METTL7BQ6UX53 244 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 XXYLT1Q8NBI6 393 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 BSNDQ8WZ55 320 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 MLXIPQ9HAP2 919 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 GBA2Q9HCG7 927 aaPredicted RBP20.71■□□□□ 0.91
USP39-202ENST00000409025 KCNG1Q9UIX4 513 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 GUCA1BQ9UMX6 200 aa20.71■□□□□ 0.91
USP39-202ENST00000409025 LOC102724159A0A0B4J2E5 919 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 DENND3A2RUS2 1198 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 TISP43B9A030 160 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 PDHXO00330 501 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 LCA5LO95447 670 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 UCHL3P15374 230 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 POLGP54098 1239 aaPredicted RBP20.7■□□□□ 0.91
USP39-202ENST00000409025 SOX10P56693 466 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 CCNA1P78396 465 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 PWP2Q15269 919 aaKnown RBP20.7■□□□□ 0.91
USP39-202ENST00000409025 TDRD12Q587J7 1177 aaKnown RBP20.7■□□□□ 0.91
USP39-202ENST00000409025 HGSNATQ68CP4 663 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 INTS8Q75QN2 995 aaKnown RBP20.7■□□□□ 0.91
USP39-202ENST00000409025 MAP4K3Q8IVH8 894 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 RDH13Q8NBN7 331 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 GPRC5AQ8NFJ5 357 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 SEPT1Q8WYJ6 367 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 CBWD1Q9BRT8 395 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 POLR3FQ9H1D9 316 aaPredicted RBP20.7■□□□□ 0.91
USP39-202ENST00000409025 HSPBP1Q9NZL4 362 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 AIPL1Q9NZN9 384 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 FBXL5Q9UKA1 691 aa20.7■□□□□ 0.91
USP39-202ENST00000409025 CCL15-CCL14A0A0B4J2E2 113 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 H0YCG3 227 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 MAPK13O15264 365 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 VAV2P52735 878 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 CYP27A1Q02318 531 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 EMC2Q15006 297 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 ASIC2Q16515 512 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 CCL15Q16663 113 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 LY6KQ17RY6 165 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 SLC35F6Q8N357 371 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 MS4A4AQ96JQ5 239 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 SPAG5Q96R06 1193 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 KIFC3Q9BVG8 833 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 NIFKQ9BYG3 293 aaKnown RBP20.7■□□□□ 0.9
USP39-202ENST00000409025 NRBP2Q9NSY0 501 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 DDX41Q9UJV9 622 aaKnown RBP20.7■□□□□ 0.9
USP39-202ENST00000409025 MYO6Q9UM54 1294 aa20.7■□□□□ 0.9
USP39-202ENST00000409025 ZNFX1Q9P2E3 1918 aaKnown RBP20.69■□□□□ 0.9
USP39-202ENST00000409025 TLR2O60603 784 aa20.69■□□□□ 0.9
USP39-202ENST00000409025 ABCD1P33897 745 aa20.69■□□□□ 0.9
USP39-202ENST00000409025 STAT5BP51692 787 aa20.69■□□□□ 0.9
USP39-202ENST00000409025 C2orf69Q8N8R5 385 aa20.69■□□□□ 0.9
USP39-202ENST00000409025 AFAP1L1Q8TED9 768 aa20.69■□□□□ 0.9
USP39-202ENST00000409025 TSGA10Q9BZW7 698 aa20.69■□□□□ 0.9
USP39-202ENST00000409025 PORCNQ9H237 461 aa20.69■□□□□ 0.9
USP39-202ENST00000409025 EFCC1Q9HA90 598 aa20.69■□□□□ 0.9
USP39-202ENST00000409025 CTAGE9A4FU28 777 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 BTBD19C9JJ37 291 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 ZNF263O14978 683 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 TRIM49P0CI25 452 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 TRIM49CP0CI26 452 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 KIF5AQ12840 1032 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 GPIHBP1Q8IV16 184 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 EHBP1Q8NDI1 1231 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 MORC4Q8TE76 937 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 PCYT2Q99447 389 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 IFIH1Q9BYX4 1025 aaKnown RBP20.68■□□□□ 0.9
USP39-202ENST00000409025 RRAGCQ9HB90 399 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 SIX2Q9NPC8 291 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 TRIM10Q9UDY6 481 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 PCDHA13Q9Y5I0 950 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 FHOD1Q9Y613 1164 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 ASB14A6NK59 587 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 TCF7P36402 384 aaPredicted RBP20.68■□□□□ 0.9
USP39-202ENST00000409025 MKRN3Q13064 507 aaKnown RBP20.68■□□□□ 0.9
USP39-202ENST00000409025 ASTE1Q2TB18 679 aaPredicted RBP20.68■□□□□ 0.9
USP39-202ENST00000409025 ANKRD23Q86SG2 305 aa20.68■□□□□ 0.9
USP39-202ENST00000409025 ARIH2O95376 493 aa20.67■□□□□ 0.9
USP39-202ENST00000409025 RFC5P40937 340 aa20.67■□□□□ 0.9
USP39-202ENST00000409025 VAMP7P51809 220 aa20.67■□□□□ 0.9
USP39-202ENST00000409025 MYL7Q01449 175 aa20.67■□□□□ 0.9
USP39-202ENST00000409025 KLHL30Q0D2K2 578 aa20.67■□□□□ 0.9
USP39-202ENST00000409025 CELF3Q5SZQ8 465 aaKnown RBP20.67■□□□□ 0.9
USP39-202ENST00000409025 TXLNBQ8N3L3 684 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms