RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 EFCAB12Q6NXP0 572 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 FANCBQ8NB91 859 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 BBXQ8WY36 941 aaPredicted RBP13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 NRDE2Q9H7Z3 1164 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 DZANK1Q9NVP4 752 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 DNAJB4Q9UDY4 337 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 COL4A3Q01955 1670 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 LILRB3O75022 631 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 GALTP07902 379 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 DARSP14868 501 aaKnown RBP13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 LIFRP42702 1097 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 AFF1P51825 1210 aaKnown RBP13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 PTPN14Q15678 1187 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 UGCGQ16739 394 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 MIS18BP1Q6P0N0 1132 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 NFXL1Q6ZNB6 911 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 NIPA1Q7RTP0 329 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 PLA2G4DQ86XP0 818 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 KIAA2013Q8IYS2 634 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ABI1Q8IZP0 508 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 DCLK2Q8N568 766 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 EXOC6Q8TAG9 804 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 RIN2Q8WYP3 895 aaPredicted RBP13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 IGSF21Q96ID5 467 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 MTA3Q9BTC8 594 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 FAM217BQ9NTX9 383 aaPredicted RBP13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 DLGAP2Q9P1A6 1054 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 GABBR1Q9UBS5 961 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 AKT3Q9Y243 479 aa13.5□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CCDC69A6NI79 296 aa13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 IPO5O00410 1097 aaKnown RBP13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ZC3H11AO75152 810 aaKnown RBP eCLIP13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 SLC11A1P49279 550 aa13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CLCN4P51793 760 aa13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 NAPAP54920 295 aa13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 JAKMIP3Q5VZ66 844 aa13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CASC1Q6TDU7 716 aa13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 DDX53Q86TM3 631 aaKnown RBP13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 MICU3Q86XE3 530 aa13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ZNF280BQ86YH2 543 aa13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 TMEM169Q96HH4 297 aa13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 KLHL5Q96PQ7 755 aa13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CEP89Q96ST8 783 aa13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 TBC1D13Q9NVG8 400 aa13.49□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CNOT1A5YKK6 2376 aaKnown RBP13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 SMCO2A6NFE2 343 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 SLC27A2O14975 620 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 FOSP01100 380 aaPredicted RBP13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 LMNAP02545 664 aaKnown RBP13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CFHP08603 1231 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CYP3A4P08684 503 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CNPP09543 421 aaKnown RBP13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 GLULP15104 373 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ZSCAN20P17040 1043 aaPredicted RBP13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 MCM5P33992 734 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 PHKA2P46019 1235 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ALDH7A1P49419 539 aaKnown RBP13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ADCY7P51828 1080 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CABP7Q86V35 215 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CKAP2LQ8IYA6 745 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ST13P5Q8NFI4 369 aaPredicted RBP13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 LENG9Q96B70 501 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 TMEM87BQ96K49 555 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 MYADMQ96S97 322 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 RTP3Q9BQQ7 232 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 LSG1Q9H089 658 aaKnown RBP13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 BRPF3Q9ULD4 1205 aa13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 V9GY48 417 aaPredicted RBP13.48□□□□□ -0.25
SPTLC1P3-201ENST00000403408 TMEM150BA6NC51 233 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 POTEMA6NI47 508 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 MAGEB2O15479 319 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 OFD1O75665 1012 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 DDHD2O94830 711 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 STBD1O95210 358 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CALM1P0DP23 149 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CALM2P0DP24 149 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CALM3P0DP25 149 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 MYBP10242 640 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 POLGP54098 1239 aaPredicted RBP13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 TARBP2Q15633 366 aaKnown RBP13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ZNF746Q6NUN9 644 aaPredicted RBP13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 PPP1R18Q6NYC8 613 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CCDC149Q6ZUS6 474 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 OTOP3Q7RTS5 596 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 TAS1R1Q7RTX1 841 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 DGLUCYQ7Z3D6 616 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 SGMS1Q86VZ5 419 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 MAML2Q8IZL2 1156 aaPredicted RBP13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 GJA10Q969M2 543 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 TCEANC2Q96MN5 208 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ZNF577Q9BSK1 485 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 SFXN1Q9H9B4 322 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 BARHL2Q9NY43 387 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 DLL3Q9NYJ7 618 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 FBXL21Q9UKT6 434 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 PCDHA10Q9Y5I2 948 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 SLC12A7Q9Y666 1083 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CEP295Q9C0D2 2601 aa13.47□□□□□ -0.25
SPTLC1P3-201ENST00000403408 LRRN2O75325 713 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms