RNA–Protein interactions for RNA: ENST00000402845.7

CACNA1C-221, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-221ENST00000402845 WDR91A4D1P6 747 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 USP17L10C9JJH3 530 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 ENC1O14682 589 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 IKBKBO14920 756 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 CA4P22748 312 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 GPSM2P81274 684 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 PHKG1Q16816 387 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 PIK3R5Q8WYR1 880 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 SP110Q9HB58 689 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 SAMSN1Q9NSI8 373 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 RPSAP08865 295 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 CCDC159P0C7I6 412 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 PDIA3P30101 505 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 TNFAIP2Q03169 654 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 UBE3CQ15386 1083 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 SLFN12LQ6IEE8 588 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 TBCKQ8TEA7 893 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 GSDMAQ96QA5 445 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 NDFIP2Q9NV92 336 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 HOXA7P31268 230 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 KPNA1P52294 538 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 SCRN1Q12765 414 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 SPATA2LQ8IUW3 424 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 VMP1Q96GC9 406 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 PIGSQ96S52 555 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 SEPT5Q99719 369 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 FSD1LQ9BXM9 530 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 PTCH1Q13635 1447 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 ARHGAP31Q2M1Z3 1444 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 KRT39Q6A163 491 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 OOSP2Q86WS3 158 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 ERICH1Q86X53 443 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 SH3TC2Q8TF17 1288 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 PYROXD1Q8WU10 500 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 KATNAL1Q9BW62 490 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 THAP9Q9H5L6 903 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 PARVGQ9HBI0 331 aa11.78□□□□□ -0.52
CACNA1C-221ENST00000402845 AP1ARQ63HQ0 302 aa11.77□□□□□ -0.52
CACNA1C-221ENST00000402845 CRLF3Q8IUI8 442 aa11.77□□□□□ -0.52
CACNA1C-221ENST00000402845 KLC2Q9H0B6 622 aa11.77□□□□□ -0.52
CACNA1C-221ENST00000402845 SELENONQ9NZV5 590 aa11.77□□□□□ -0.52
CACNA1C-221ENST00000402845 DYNC1LI2O43237 492 aaPredicted RBP11.77□□□□□ -0.52
CACNA1C-221ENST00000402845 CIAO1O76071 339 aa11.77□□□□□ -0.52
CACNA1C-221ENST00000402845 CDC37Q16543 378 aaPredicted RBP11.77□□□□□ -0.52
CACNA1C-221ENST00000402845 TXNRD1Q16881 649 aa11.77□□□□□ -0.52
CACNA1C-221ENST00000402845 ENGASEQ8NFI3 743 aa11.77□□□□□ -0.52
CACNA1C-221ENST00000402845 DCUN1D1Q96GG9 259 aa11.77□□□□□ -0.52
CACNA1C-221ENST00000402845 VPS39Q96JC1 886 aa11.77□□□□□ -0.52
CACNA1C-221ENST00000402845 ERVK-7P63135 1459 aa11.77□□□□□ -0.52
CACNA1C-221ENST00000402845 E5RI56 91 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 K7ERI5 159 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 IPO5O00410 1097 aaKnown RBP11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 NR1H3Q13133 447 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 RBBP7Q16576 425 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 LVRNQ6Q4G3 990 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 TAS2R42Q7RTR8 314 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 B4GALNT2Q8NHY0 566 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 KLHL29Q96CT2 875 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 CDV3Q9UKY7 258 aaKnown RBP11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 ARAP3Q8WWN8 1544 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 ASB14A6NK59 587 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 ESRRAP11474 423 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 DR1Q01658 176 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 ZNF568Q3ZCX4 644 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 SYTL3Q4VX76 610 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 CCDC92Q53HC0 331 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 NDE1Q9NXR1 346 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 LCMT1Q9UIC8 334 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 CDC23Q9UJX2 597 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 KRT14P02533 472 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 SCG3Q8WXD2 468 aaKnown RBP11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 RNF26Q9BY78 433 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 CHCHD3Q9NX63 227 aaKnown RBP11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 RWDD2AQ9UIY3 292 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 MSRAQ9UJ68 235 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 INTUQ9ULD6 942 aa11.77□□□□□ -0.53
CACNA1C-221ENST00000402845 E2F6O75461 281 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 LDHAP00338 332 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 HMBSP08397 361 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 TRIML2Q8N7C3 387 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 RASGRP4Q8TDF6 673 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 RAPGEF5Q92565 580 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 MTBPQ96DY7 904 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 CENPKQ9BS16 269 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 PCDHA13Q9Y5I0 950 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 SPTLC1O15269 473 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 TJP3O95049 919 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 FTCDO95954 541 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 DEUP1Q05D60 604 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 CUL1Q13616 776 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 LBRQ14739 615 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 BBS9Q3SYG4 887 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 EPAS1Q99814 870 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 NUDT12Q9BQG2 462 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 NHEJ1Q9H9Q4 299 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 IL6STP40189 918 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 C16orf72Q14CZ0 275 aa11.76□□□□□ -0.53
CACNA1C-221ENST00000402845 SATB2Q9UPW6 733 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms