RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 TFR2Q9UP52 801 aa13.41□□□□□ -0.26
CLIP4-203ENST00000401617 MCM3APO60318 1980 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 SOCS7O14512 581 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 EXOC3O60645 756 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 UBA1P22314 1058 aaKnown RBP13.4□□□□□ -0.26
CLIP4-203ENST00000401617 SMTNP53814 917 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 AMPD2Q01433 879 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 BFSP1Q12934 665 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 Q3C1V9 767 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 MAP4K3Q8IVH8 894 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 ZNF526Q8TF50 670 aaPredicted RBP13.4□□□□□ -0.26
CLIP4-203ENST00000401617 BSNDQ8WZ55 320 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 MAP7D2Q96T17 732 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 GCNT4Q9P109 453 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 TBX20Q9UMR3 447 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 FHOD1Q9Y613 1164 aa13.4□□□□□ -0.26
CLIP4-203ENST00000401617 EFCAB8A8MWE9 144 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 AKR1B10O60218 316 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 FARP2O94887 1054 aaPredicted RBP13.39□□□□□ -0.27
CLIP4-203ENST00000401617 PRKCIP41743 596 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 KIF5AQ12840 1032 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 DMP1Q13316 513 aaPredicted RBP13.39□□□□□ -0.27
CLIP4-203ENST00000401617 SEPT14Q6ZU15 432 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
CLIP4-203ENST00000401617 CEP89Q96ST8 783 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 CBWD1Q9BRT8 395 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 NIFKQ9BYG3 293 aaKnown RBP13.39□□□□□ -0.27
CLIP4-203ENST00000401617 IFIH1Q9BYX4 1025 aaKnown RBP13.39□□□□□ -0.27
CLIP4-203ENST00000401617 DEF6Q9H4E7 631 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 EXOC7Q9UPT5 735 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 DAAM1Q9Y4D1 1078 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 SIP14410 1827 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 GSTTP1A0A1W2PQM5 241 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 TISP43B9A030 160 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 PMM2O15305 246 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 SNAPC2Q13487 334 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 RAPGEF1Q13905 1077 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 EAPPQ56P03 285 aaPredicted RBP13.39□□□□□ -0.27
CLIP4-203ENST00000401617 XXYLT1Q8NBI6 393 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 SHCBP1Q8NEM2 672 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 MORC4Q8TE76 937 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 ATP6V0A4Q9HBG4 840 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 ZNF302Q9NR11 478 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 HSPBP1Q9NZL4 362 aa13.39□□□□□ -0.27
CLIP4-203ENST00000401617 SEPT9Q9UHD8 586 aaPredicted RBP13.39□□□□□ -0.27
CLIP4-203ENST00000401617 LOC102724159A0A0B4J2E5 919 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 P4HA2O15460 535 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 ADSSP30520 456 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 SP4Q02446 784 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 NEDD9Q14511 834 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 PWP2Q15269 919 aaKnown RBP13.38□□□□□ -0.27
CLIP4-203ENST00000401617 ELF2Q15723 593 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 ASIC2Q16515 512 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 ERCC6LQ2NKX8 1250 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 CBWD6Q4V339 395 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 CBWD3Q5JTY5 395 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 CBWD5Q5RIA9 395 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 C1orf220Q5T0J3 134 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 RSRC2Q7L4I2 434 aaKnown RBP13.38□□□□□ -0.27
CLIP4-203ENST00000401617 TRMT1LQ7Z2T5 733 aaKnown RBP13.38□□□□□ -0.27
CLIP4-203ENST00000401617 MNS1Q8NEH6 495 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 LMO3Q8TAP4 145 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 PCYT2Q99447 389 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 MROH8Q9H579 483 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 DHX33Q9H6R0 707 aaKnown RBP13.38□□□□□ -0.27
CLIP4-203ENST00000401617 KMT5AQ9NQR1 393 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 AJAP1Q9UKB5 411 aaPredicted RBP13.38□□□□□ -0.27
CLIP4-203ENST00000401617 BZW2Q9Y6E2 419 aaKnown RBP13.38□□□□□ -0.27
CLIP4-203ENST00000401617 DUSP10Q9Y6W6 482 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 GRIN3BO60391 1043 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 OATP04181 439 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 ANXA13P27216 316 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 MAGEA1P43355 309 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 KLHL30Q0D2K2 578 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 GPR162Q16538 588 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 SLC18A3Q16572 532 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 TDRD12Q587J7 1177 aaKnown RBP13.38□□□□□ -0.27
CLIP4-203ENST00000401617 PAPD7Q5XG87 772 aaKnown RBP13.38□□□□□ -0.27
CLIP4-203ENST00000401617 AFAP1L1Q8TED9 768 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 GTF3C2Q8WUA4 911 aaPredicted RBP13.38□□□□□ -0.27
CLIP4-203ENST00000401617 SLC10A4Q96EP9 437 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 ARHGAP28Q9P2N2 729 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLIP4-203ENST00000401617 KCNG1Q9UIX4 513 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 USP20Q9Y2K6 914 aa13.38□□□□□ -0.27
CLIP4-203ENST00000401617 V9GYY5 206 aaPredicted RBP13.38□□□□□ -0.27
CLIP4-203ENST00000401617 ADGRA3Q8IWK6 1321 aa13.37□□□□□ -0.27
CLIP4-203ENST00000401617 DENND3A2RUS2 1198 aa13.37□□□□□ -0.27
CLIP4-203ENST00000401617 CCDC169A6NNP5 214 aa13.37□□□□□ -0.27
CLIP4-203ENST00000401617 ANKRD63C9JTQ0 380 aa13.37□□□□□ -0.27
CLIP4-203ENST00000401617 TRIM49P0CI25 452 aa13.37□□□□□ -0.27
CLIP4-203ENST00000401617 TRIM49CP0CI26 452 aa13.37□□□□□ -0.27
CLIP4-203ENST00000401617 KRT13P13646 458 aa13.37□□□□□ -0.27
CLIP4-203ENST00000401617 ABCD1P33897 745 aa13.37□□□□□ -0.27
CLIP4-203ENST00000401617 VAMP7P51809 220 aa13.37□□□□□ -0.27
CLIP4-203ENST00000401617 SOX10P56693 466 aa13.37□□□□□ -0.27
CLIP4-203ENST00000401617 ERVK-9P63128 1117 aa13.37□□□□□ -0.27
CLIP4-203ENST00000401617 GFPT1Q06210 699 aaPredicted RBP13.37□□□□□ -0.27
CLIP4-203ENST00000401617 TARBP2Q15633 366 aaKnown RBP13.37□□□□□ -0.27
CLIP4-203ENST00000401617 IQCEQ6IPM2 695 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms