RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 F8VZ95 297 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TRAPPC3O43617 180 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 KIF1CO43896 1103 aaKnown RBP11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 RSPH10BP0C881 870 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 GRAPQ13588 217 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ANKRD35Q8N283 1001 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 GRAPLQ8TC17 118 aaPredicted RBP11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 CCHCR1Q8TD31 782 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 NSMCE1Q8WV22 266 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TGS1Q96RS0 853 aaKnown RBP11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ADAM33Q9BZ11 813 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 YIPF3Q9GZM5 350 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 JMJD4Q9H9V9 463 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 GRIN2DO15399 1336 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 CFAP73A6NFT4 308 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 NKRFO15226 690 aaKnown RBP eCLIP11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 AGTP01019 485 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ZNF543Q08ER8 600 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 NFIXQ14938 502 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 HP1BP3Q5SSJ5 553 aaPredicted RBP11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 RNF207Q6ZRF8 634 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TMC3Q7Z5M5 1100 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 EPS8L3Q8TE67 593 aaKnown RBP11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 PABPC3Q9H361 631 aaKnown RBP11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SYNCQ9H7C4 482 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SPATS2LQ9NUQ6 558 aaKnown RBP11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 AGTPBP1Q9UPW5 1226 aa11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 MED1Q15648 1581 aaPredicted RBP11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 AFDNP55196 1824 aaKnown RBP11.96□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TOM1O60784 492 aa11.96□□□□□ -0.5
CSGALNACT1-202ENST00000397998 STRN3Q13033 797 aa11.96□□□□□ -0.5
CSGALNACT1-202ENST00000397998 BARGINQ6ZT62 677 aa11.96□□□□□ -0.5
CSGALNACT1-202ENST00000397998 C16orf86Q6ZW13 317 aa11.96□□□□□ -0.5
CSGALNACT1-202ENST00000397998 AIPL1Q9NZN9 384 aa11.96□□□□□ -0.5
CSGALNACT1-202ENST00000397998 EXOC1LA0A1B0GW35 172 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 ESYT2A0FGR8 921 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 RASA4BC9J798 803 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 RASA4O43374 803 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 MED24O75448 989 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 AKAP3O75969 853 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 TROVE2P10155 538 aaKnown RBP eCLIP11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 CA4P22748 312 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 DCUN1D2Q6PH85 259 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 C18orf8Q96DM3 657 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 CCDC17Q96LX7 622 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 SMC6Q96SB8 1091 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 IMPG2Q9BZV3 1241 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 THAP2Q9H0W7 228 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 USP15Q9Y4E8 981 aaPredicted RBP11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 OPLAHO14841 1288 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 ATMINO43313 823 aaPredicted RBP11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 TLR2O60603 784 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 MYCLP12524 364 aaPredicted RBP11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 TNNI1P19237 187 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 TNFRSF8P28908 595 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 FAM102BQ5T8I3 360 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 DYDC2Q96IM9 177 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 LBHD1Q9BQE6 289 aaPredicted RBP11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 SEMA4AQ9H3S1 761 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 L3MBTL1Q9Y468 752 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 SLIT3O75094 1523 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 TMEM120BA0PK00 339 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 SKAP2O75563 359 aaPredicted RBP11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 FLT3P36888 993 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 FMO5P49326 533 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 MFAP3P55082 362 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 QPCTQ16769 361 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 CCDC62Q6P9F0 684 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 NT5C1BQ96P26 610 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 NACC1Q96RE7 527 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 ZNF577Q9BSK1 485 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 DDX23Q9BUQ8 820 aaKnown RBP11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 STK33Q9BYT3 514 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 ANAPC7Q9UJX3 599 aa11.95□□□□□ -0.5
CSGALNACT1-202ENST00000397998 LRRD1A4D1F6 860 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 RASSF10A6NK89 507 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 IGF2BP3O00425 579 aaKnown RBP eCLIP11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 SMIM24O75264 130 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 LUC7L3O95232 432 aaKnown RBP11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 PDHA1P08559 390 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 POLR2MP0CAP2 368 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 HGSNATQ68CP4 663 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 ARHGAP27Q6ZUM4 889 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 CATSPER3Q86XQ3 398 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 CD302Q8IX05 232 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 MREGQ8N565 214 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 ZNF564Q8TBZ8 553 aaPredicted RBP11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 EIF2AK1Q9BQI3 630 aaKnown RBP11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 NUP85Q9BW27 656 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 TXLNGQ9NUQ3 528 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 TOPAZ1Q8N9V7 1692 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 SETD1AO15047 1707 aaKnown RBP11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 PHF2O75151 1096 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 IFI35P80217 286 aaPredicted RBP11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 PPP1R21Q6ZMI0 780 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 KDM3BQ7LBC6 1761 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 SPATA21Q7Z572 469 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 SCYL3Q8IZE3 742 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 AGPAT1Q99943 283 aa11.94□□□□□ -0.5
CSGALNACT1-202ENST00000397998 FAM129AQ9BZQ8 928 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms