RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 TM4SF1P30408 202 aa18.74■□□□□ 0.59
EWSR1-206ENST00000397938 CHRNA3P32297 505 aa18.74■□□□□ 0.59
EWSR1-206ENST00000397938 PSMC6P62333 389 aa18.74■□□□□ 0.59
EWSR1-206ENST00000397938 KCNJ2P63252 427 aa18.74■□□□□ 0.59
EWSR1-206ENST00000397938 PABPC4Q13310 644 aaKnown RBP eCLIP18.74■□□□□ 0.591e-6■■□□□ 14.1
EWSR1-206ENST00000397938 CATSPER3Q86XQ3 398 aa18.74■□□□□ 0.59
EWSR1-206ENST00000397938 THOC1Q96FV9 657 aaKnown RBP18.74■□□□□ 0.59
EWSR1-206ENST00000397938 BORCS6Q96GS4 357 aa18.74■□□□□ 0.59
EWSR1-206ENST00000397938 STK33Q9BYT3 514 aa18.74■□□□□ 0.59
EWSR1-206ENST00000397938 RIPK2O43353 540 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 HSPA6P17066 643 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 ZNF131P52739 623 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 AUHQ13825 339 aaKnown RBP18.73■□□□□ 0.59
EWSR1-206ENST00000397938 GALNTL6Q49A17 601 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 TAOK1Q7L7X3 1001 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 SLC51AQ86UW1 340 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 CCDC24Q8N4L8 307 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 NOP53Q9NZM5 478 aaKnown RBP18.73■□□□□ 0.59
EWSR1-206ENST00000397938 TMOD4Q9NZQ9 345 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 ANKIB1Q9P2G1 1089 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 PCDHB13Q9Y5F0 798 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 SYNGAP1Q96PV0 1343 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 PLCG2P16885 1265 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 FGFR4P22455 802 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 SLCO1A2P46721 670 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 ALDH5A1P51649 535 aaPredicted RBP18.73■□□□□ 0.59
EWSR1-206ENST00000397938 EIF6P56537 245 aaKnown RBP18.73■□□□□ 0.59
EWSR1-206ENST00000397938 RHBDL3P58872 404 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 DRAP1Q14919 205 aaPredicted RBP18.73■□□□□ 0.59
EWSR1-206ENST00000397938 MFSD5Q6N075 450 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 NBPF5PQ86XG9 351 aaPredicted RBP18.73■□□□□ 0.59
EWSR1-206ENST00000397938 PRELID2Q8N945 189 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 UHMK1Q8TAS1 419 aaKnown RBP18.73■□□□□ 0.59
EWSR1-206ENST00000397938 THAP2Q9H0W7 228 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 PCYOX1Q9UHG3 505 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 COG5Q9UP83 839 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 USP15Q9Y4E8 981 aaPredicted RBP18.73■□□□□ 0.59
EWSR1-206ENST00000397938 PCDHA3Q9Y5H8 950 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 CD2APQ9Y5K6 639 aa18.73■□□□□ 0.59
EWSR1-206ENST00000397938 IGKV6D-41A0A0C4DH26 115 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 PODXLO00592 558 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 RASGRF2O14827 1237 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 RGL2O15211 777 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 CLIC2O15247 247 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 SPIRE1Q08AE8 756 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 SLMAPQ14BN4 828 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 TTBK2Q6IQ55 1244 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 AADACL2Q6P093 401 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 BARGINQ6ZT62 677 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 ZNF804AQ7Z570 1209 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 CLEC10AQ8IUN9 316 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 SLFN12Q8IYM2 578 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 LINC00116Q8NCU8 138 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 MBOAT7Q96N66 472 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 GPR88Q9GZN0 384 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 ECT2Q9H8V3 914 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 DNAJC12Q9UKB3 198 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 MYO3BQ8WXR4 1341 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 CYP3A7-CYP3A51PA0A087WV96 503 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 MEIS1O00470 390 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 ZBTB5O15062 677 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 CYP3A7P24462 503 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 DDB1Q16531 1140 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 ZNF622Q969S3 477 aaKnown RBP eCLIP18.72■□□□□ 0.595e-8■■□□□ 12.4
EWSR1-206ENST00000397938 DNM3Q9UQ16 869 aa18.72■□□□□ 0.59
EWSR1-206ENST00000397938 FRMPD4Q14CM0 1322 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 SPATA31A1Q5TZJ5 1347 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 ANKRD62A6NC57 917 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 RSPH10B2B2RC85 870 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 RSPH10BP0C881 870 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 ALAS1P13196 640 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 RARGP13631 454 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 CTNNA2P26232 953 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 TTC27Q6P3X3 843 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 CCDC113Q9H0I3 377 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 TAS2R14Q9NYV8 317 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 GCNT3O95395 438 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 AKR1B1P15121 316 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 HADHBP55084 474 aaKnown RBP18.71■□□□□ 0.59
EWSR1-206ENST00000397938 PPP2R5AQ15172 486 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 EXOC3L1Q86VI1 746 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 GBP7Q8N8V2 638 aaPredicted RBP18.71■□□□□ 0.59
EWSR1-206ENST00000397938 HOMER3Q9NSC5 361 aa18.71■□□□□ 0.59
EWSR1-206ENST00000397938 FOCADQ5VW36 1801 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 MIF4GDA9UHW6 222 aaKnown RBP18.7■□□□□ 0.58
EWSR1-206ENST00000397938 USP17L15C9J2P7 530 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 USP17L13C9JLJ4 530 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 USP17L11C9JVI0 530 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 USP17L18D6R9N7 530 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 USP17L22D6RA61 530 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 USP17L17D6RBQ6 530 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 USP17L19D6RCP7 530 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 USP17L20D6RJB6 530 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 IGF2BP3O00425 579 aaKnown RBP eCLIP18.7■□□□□ 0.58
EWSR1-206ENST00000397938 MYCNP04198 464 aaPredicted RBP18.7■□□□□ 0.58
EWSR1-206ENST00000397938 SPATA31C1P0DKV0 1188 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 RPA1P27694 616 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 KCNA1Q09470 495 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 USP17L24Q0WX57 530 aa18.7■□□□□ 0.58
EWSR1-206ENST00000397938 CCDC38Q502W7 563 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms