RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 LIMD1Q9UGP4 676 aa18.21■□□□□ 0.51
CUX2-202ENST00000397643 IRAK3Q9Y616 596 aa18.21■□□□□ 0.51
CUX2-202ENST00000397643 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.2■□□□□ 0.5
CUX2-202ENST00000397643 CDC45O75419 566 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 CXCL14O95715 111 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 OATP04181 439 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 CLCN5P51795 746 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 DRP2Q13474 957 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 UGCGQ16739 394 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 PFKFB3Q16875 520 aaPredicted RBP18.2■□□□□ 0.5
CUX2-202ENST00000397643 FRMD5Q7Z6J6 570 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 VPS52Q8N1B4 723 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 ZNF710Q8N1W2 664 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 TMEM169Q96HH4 297 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 ZMYND12Q9H0C1 365 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 ZNF292O60281 2723 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 WDR87Q6ZQQ6 2873 aa18.2■□□□□ 0.5
CUX2-202ENST00000397643 GOLGA8AA7E2F4 631 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 GOLGA8BA8MQT2 603 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 WDR64B1ANS9 1081 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 EDIL3O43854 480 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 CSDE1O75534 798 aaKnown RBP18.19■□□□□ 0.5
CUX2-202ENST00000397643 CTSAP10619 480 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 TMOD1P28289 359 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 CIITAP33076 1130 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 ALDH7A1P49419 539 aaKnown RBP18.19■□□□□ 0.5
CUX2-202ENST00000397643 PRKCEQ02156 737 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 PRR16Q569H4 304 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 ATAT1Q5SQI0 421 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 MCTP2Q6DN12 878 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 VN1R3Q9BXE9 311 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 ANO2Q9NQ90 1003 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 DACT1Q9NYF0 836 aa18.19■□□□□ 0.5
CUX2-202ENST00000397643 DBR1Q9UK59 544 aaKnown RBP18.19■□□□□ 0.5
CUX2-202ENST00000397643 EP300Q09472 2414 aaPredicted RBP18.19■□□□□ 0.5
CUX2-202ENST00000397643 ZC3H11AO75152 810 aaKnown RBP eCLIP18.18■□□□□ 0.5
CUX2-202ENST00000397643 NPR3P17342 541 aa18.18■□□□□ 0.5
CUX2-202ENST00000397643 CA8P35219 290 aa18.18■□□□□ 0.5
CUX2-202ENST00000397643 TARBP2Q15633 366 aaKnown RBP18.18■□□□□ 0.5
CUX2-202ENST00000397643 DDX53Q86TM3 631 aaKnown RBP18.18■□□□□ 0.5
CUX2-202ENST00000397643 REXO1Q8N1G1 1221 aaKnown RBP18.18■□□□□ 0.5
CUX2-202ENST00000397643 PLCD3Q8N3E9 789 aa18.18■□□□□ 0.5
CUX2-202ENST00000397643 IGSF21Q96ID5 467 aa18.18■□□□□ 0.5
CUX2-202ENST00000397643 CEP89Q96ST8 783 aa18.18■□□□□ 0.5
CUX2-202ENST00000397643 TRAIPQ9BWF2 469 aa18.18■□□□□ 0.5
CUX2-202ENST00000397643 C2orf16Q68DN1 1984 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 KLF18A0A0U1RQI7 1052 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 MEIS3P2A8K0S8 358 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 B4GALT3O60512 393 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 ADD1P35611 737 aaKnown RBP18.17■□□□□ 0.5
CUX2-202ENST00000397643 PHKA2P46019 1235 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 RCAN1P53805 252 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 POLGP54098 1239 aaPredicted RBP18.17■□□□□ 0.5
CUX2-202ENST00000397643 ADCK5Q3MIX3 580 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 TMC5Q6UXY8 1006 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 DHX32Q7L7V1 743 aaKnown RBP18.17■□□□□ 0.5
CUX2-202ENST00000397643 NLRP7Q8WX94 980 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 LPPQ93052 612 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 NKD2Q969F2 451 aaPredicted RBP18.17■□□□□ 0.5
CUX2-202ENST00000397643 MFSD1Q9H3U5 465 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 NRDE2Q9H7Z3 1164 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 CYP26B1Q9NR63 512 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 DISC1Q9NRI5 854 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 TBC1D13Q9NVG8 400 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 TCEAL9Q9UHQ7 104 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 SAMM50Q9Y512 469 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 DNAH14Q0VDD8 3507 aa18.17■□□□□ 0.5
CUX2-202ENST00000397643 PI15O43692 258 aa18.16■□□□□ 0.5
CUX2-202ENST00000397643 GALTP07902 379 aa18.16■□□□□ 0.5
CUX2-202ENST00000397643 AOC1P19801 751 aa18.16■□□□□ 0.5
CUX2-202ENST00000397643 GIT2Q14161 759 aa18.16■□□□□ 0.5
CUX2-202ENST00000397643 PTPN14Q15678 1187 aa18.16■□□□□ 0.5
CUX2-202ENST00000397643 GPR149Q86SP6 731 aa18.16■□□□□ 0.5
CUX2-202ENST00000397643 RASEFQ8IZ41 740 aa18.16■□□□□ 0.5
CUX2-202ENST00000397643 FLCNQ8NFG4 579 aa18.16■□□□□ 0.5
CUX2-202ENST00000397643 RSPH1Q8WYR4 309 aa18.16■□□□□ 0.5
CUX2-202ENST00000397643 SCLT1Q96NL6 688 aa18.16■□□□□ 0.5
CUX2-202ENST00000397643 CHST12Q9NRB3 414 aa18.16■□□□□ 0.5
CUX2-202ENST00000397643 NRBP2Q9NSY0 501 aa18.16■□□□□ 0.5
CUX2-202ENST00000397643 MSH4O15457 936 aa18.15■□□□□ 0.5
CUX2-202ENST00000397643 STBD1O95210 358 aa18.15■□□□□ 0.5
CUX2-202ENST00000397643 TBC1D8BQ0IIM8 1120 aa18.15■□□□□ 0.5
CUX2-202ENST00000397643 BMS1Q14692 1282 aaKnown RBP18.15■□□□□ 0.5
CUX2-202ENST00000397643 CABP7Q86V35 215 aa18.15■□□□□ 0.5
CUX2-202ENST00000397643 CCDC105Q8IYK2 499 aa18.15■□□□□ 0.5
CUX2-202ENST00000397643 SFXN1Q9H9B4 322 aa18.15■□□□□ 0.5
CUX2-202ENST00000397643 DNAJB4Q9UDY4 337 aa18.15■□□□□ 0.5
CUX2-202ENST00000397643 IGKV6-21A0A0C4DH24 114 aa18.14■□□□□ 0.49
CUX2-202ENST00000397643 TMEM150BA6NC51 233 aa18.14■□□□□ 0.49
CUX2-202ENST00000397643 OFD1O75665 1012 aa18.14■□□□□ 0.49
CUX2-202ENST00000397643 SLC11A1P49279 550 aa18.14■□□□□ 0.49
CUX2-202ENST00000397643 TDGQ13569 410 aa18.14■□□□□ 0.49
CUX2-202ENST00000397643 TSGA10IPQ3SY00 556 aa18.14■□□□□ 0.49
CUX2-202ENST00000397643 LONRF3Q496Y0 759 aa18.14■□□□□ 0.49
CUX2-202ENST00000397643 NOMO2Q5JPE7 1267 aa18.14■□□□□ 0.49
CUX2-202ENST00000397643 RNF20Q5VTR2 975 aa18.14■□□□□ 0.49
CUX2-202ENST00000397643 CCDC149Q6ZUS6 474 aa18.14■□□□□ 0.49
CUX2-202ENST00000397643 ERMP1Q7Z2K6 904 aa18.14■□□□□ 0.49
CUX2-202ENST00000397643 ADSSL1Q8N142 457 aa18.14■□□□□ 0.49
CUX2-202ENST00000397643 SLC5A5Q92911 643 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms