RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 MYBPC2Q14324 1141 aa18.03■□□□□ 0.48
TRIM39-205ENST00000396551 NBPF12Q5TAG4 269 aaPredicted RBP18.03■□□□□ 0.48
TRIM39-205ENST00000396551 TRERF1Q96PN7 1200 aa18.03■□□□□ 0.48
TRIM39-205ENST00000396551 PXMP2Q9NR77 195 aa18.03■□□□□ 0.48
TRIM39-205ENST00000396551 TBC1D22BQ9NU19 505 aa18.03■□□□□ 0.48
TRIM39-205ENST00000396551 AGPSO00116 658 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 BACH1O14867 736 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 KIF4AO95239 1232 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 CCNE2O96020 404 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 H2AFZP0C0S5 128 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 PTPROQ16827 1216 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 HSP90B2PQ58FF3 399 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 PHLDB3Q6NSJ2 640 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 H2AFVQ71UI9 128 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 ATG4CQ96DT6 458 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 CBWD1Q9BRT8 395 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 GINM1Q9NU53 330 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 PSD3Q9NYI0 1048 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 APEX2Q9UBZ4 518 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 HACL1Q9UJ83 578 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 RIPK3Q9Y572 518 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 RNASE9P60153 205 aaKnown RBP18.02■□□□□ 0.48
TRIM39-205ENST00000396551 TBC1D10BQ4KMP7 808 aaPredicted RBP18.02■□□□□ 0.48
TRIM39-205ENST00000396551 VPS36Q86VN1 386 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 RIN2Q8WYP3 895 aaPredicted RBP18.02■□□□□ 0.48
TRIM39-205ENST00000396551 RMDN3Q96TC7 470 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 GPRC5CQ9NQ84 441 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 BCS1LQ9Y276 419 aa18.02■□□□□ 0.48
TRIM39-205ENST00000396551 LRRN2O75325 713 aa18.02■□□□□ 0.47
TRIM39-205ENST00000396551 TNFRSF8P28908 595 aa18.02■□□□□ 0.47
TRIM39-205ENST00000396551 RPS6KA1Q15418 735 aa18.02■□□□□ 0.47
TRIM39-205ENST00000396551 GLE1Q53GS7 698 aaKnown RBP18.02■□□□□ 0.47
TRIM39-205ENST00000396551 SND1Q7KZF4 910 aaKnown RBP eCLIP18.02■□□□□ 0.47
TRIM39-205ENST00000396551 GLYCTKQ8IVS8 523 aa18.02■□□□□ 0.47
TRIM39-205ENST00000396551 MICALL2Q8IY33 904 aa18.02■□□□□ 0.47
TRIM39-205ENST00000396551 KIAA1217Q5T5P2 1943 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 VWA5AO00534 786 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 GLI1P08151 1106 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 GMPSP49915 693 aaPredicted RBP18.01■□□□□ 0.47
TRIM39-205ENST00000396551 GALCP54803 685 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 C1orf220Q5T0J3 134 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 RNF207Q6ZRF8 634 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 ACCSQ96QU6 501 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 TMEM206Q9H813 350 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 INTUQ9ULD6 942 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 A0A0A6YYK5 440 aaPredicted RBP18.01■□□□□ 0.47
TRIM39-205ENST00000396551 KCNK3O14649 394 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 ZBED4O75132 1171 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 ZBTB7AO95365 584 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 ALCAMQ13740 583 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 NSMFQ6X4W1 530 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.01■□□□□ 0.47
TRIM39-205ENST00000396551 TRMT1LQ7Z2T5 733 aaKnown RBP18.01■□□□□ 0.47
TRIM39-205ENST00000396551 SLFN11Q7Z7L1 901 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 C4orf19Q8IY42 314 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 SAMD3Q8N6K7 520 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 USP38Q8NB14 1042 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 PLEKHO2Q8TD55 490 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 EMSYQ7Z589 1322 aa18.01■□□□□ 0.47
TRIM39-205ENST00000396551 ZSCAN5CA6NGD5 496 aaPredicted RBP18■□□□□ 0.47
TRIM39-205ENST00000396551 CES2O00748 559 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 RNF40O75150 1001 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 RPS12P25398 132 aaKnown RBP18■□□□□ 0.47
TRIM39-205ENST00000396551 GGCXP38435 758 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 GTF2BQ00403 316 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 PPP3CAQ08209 521 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 IFI16Q16666 785 aaKnown RBP18■□□□□ 0.47
TRIM39-205ENST00000396551 PLA2G4FQ68DD2 849 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 HAUS6Q7Z4H7 955 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 C12orf56Q8IXR9 622 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 TMEM174Q8WUU8 243 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 PLEKHA4Q9H4M7 779 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 TMEM59LQ9UK28 342 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 STXBP5LQ9Y2K9 1186 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 DOCK5Q9H7D0 1870 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 NPEPPSP55786 919 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 ARHGAP44Q17R89 818 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 GDF3Q9NR23 364 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 PHIPQ8WWQ0 1821 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 LMAN1P49257 510 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 TAF4BQ92750 862 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 KRT12Q99456 494 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 FZD1Q9UP38 647 aa18■□□□□ 0.47
TRIM39-205ENST00000396551 IGSF9BQ9UPX0 1349 aa17.99■□□□□ 0.47
TRIM39-205ENST00000396551 SLC16A4O15374 487 aa17.99■□□□□ 0.47
TRIM39-205ENST00000396551 EPHB4P54760 987 aa17.99■□□□□ 0.47
TRIM39-205ENST00000396551 SF3B2Q13435 895 aaKnown RBP17.99■□□□□ 0.47
TRIM39-205ENST00000396551 ARHGEF16Q5VV41 709 aa17.99■□□□□ 0.47
TRIM39-205ENST00000396551 ST6GALNAC4Q9H4F1 302 aa17.99■□□□□ 0.47
TRIM39-205ENST00000396551 HSPBP1Q9NZL4 362 aa17.99■□□□□ 0.47
TRIM39-205ENST00000396551 CTDP1Q9Y5B0 961 aaPredicted RBP17.99■□□□□ 0.47
TRIM39-205ENST00000396551 ARID2Q68CP9 1835 aa17.99■□□□□ 0.47
TRIM39-205ENST00000396551 TESPA1A2RU30 521 aaPredicted RBP17.99■□□□□ 0.47
TRIM39-205ENST00000396551 KRT13P13646 458 aa17.99■□□□□ 0.47
TRIM39-205ENST00000396551 VAMP7P51809 220 aa17.99■□□□□ 0.47
TRIM39-205ENST00000396551 NCKAP1LP55160 1127 aa17.99■□□□□ 0.47
TRIM39-205ENST00000396551 PEX3P56589 373 aa17.99■□□□□ 0.47
TRIM39-205ENST00000396551 PSMC5P62195 406 aa17.99■□□□□ 0.47
TRIM39-205ENST00000396551 BAATQ14032 418 aaPredicted RBP17.99■□□□□ 0.47
TRIM39-205ENST00000396551 INTS8Q75QN2 995 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms