RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 BIN2Q9UBW5 565 aaPredicted RBP20.37■□□□□ 0.85
HOXC6-202ENST00000394331 STK38LQ9Y2H1 464 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 UTP11Q9Y3A2 253 aaKnown RBP20.37■□□□□ 0.85
HOXC6-202ENST00000394331 USP17L5A8MUK1 530 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 ASPRV1Q53RT3 343 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 C10orf76Q5T2E6 689 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 PLEKHG4BQ96PX9 1271 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 MMRN2Q9H8L6 949 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 STK17AQ9UEE5 414 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 USP21Q9UK80 565 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 TMEM154Q6P9G4 183 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 SV2BQ7L1I2 683 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 NEK9Q8TD19 979 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 ASAP3Q8TDY4 903 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 TBC1D5Q92609 795 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 FAM136AQ96C01 138 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 FAM192AQ9GZU8 254 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 LRRC4CQ9HCJ2 640 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 CEP72Q9P209 647 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 PRKAG3Q9UGI9 489 aa20.37■□□□□ 0.85
HOXC6-202ENST00000394331 MAP3K13O43283 966 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 ATP5HO75947 161 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 FGFR1OPO95684 399 aaKnown RBP20.36■□□□□ 0.85
HOXC6-202ENST00000394331 TPBGLP0DKB5 382 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 KIF2BQ8N4N8 673 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 MAIP1Q8WWC4 291 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 RAB34Q9BZG1 259 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 UBA5Q9GZZ9 404 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 DMAP1Q9NPF5 467 aaPredicted RBP20.36■□□□□ 0.85
HOXC6-202ENST00000394331 NOC2LQ9Y3T9 749 aaKnown RBP20.36■□□□□ 0.85
HOXC6-202ENST00000394331 MROH7Q68CQ1 1323 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 UNC5CO95185 931 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 PENKP01210 267 aaPredicted RBP20.36■□□□□ 0.85
HOXC6-202ENST00000394331 HOXA7P31268 230 aaPredicted RBP20.36■□□□□ 0.85
HOXC6-202ENST00000394331 CNGA2Q16280 664 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 TMEM266Q2M3C6 531 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 TMC4Q7Z404 712 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 MTMR9Q96QG7 549 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 ZWILCHQ9H900 591 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 PCMTD2Q9NV79 361 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 CTTNBP2NLQ9P2B4 639 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 PACSIN2Q9UNF0 486 aaPredicted RBP20.36■□□□□ 0.85
HOXC6-202ENST00000394331 PLIN4Q96Q06 1357 aa20.36■□□□□ 0.85
HOXC6-202ENST00000394331 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.35■□□□□ 0.85
HOXC6-202ENST00000394331 RGS16O15492 202 aaPredicted RBP20.35■□□□□ 0.85
HOXC6-202ENST00000394331 CREB3O43889 395 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 PEX11AO75192 247 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 TXKP42681 527 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 FXR2P51116 673 aaKnown RBP eCLIP20.35■□□□□ 0.85
HOXC6-202ENST00000394331 CALCRLQ16602 461 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 CENPPQ6IPU0 288 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 KCNV2Q8TDN2 545 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 MTFR1LQ9H019 292 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 MTMR4Q9NYA4 1195 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 PHF24Q9UPV7 400 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 PVALEFA0A1B0GWK0 134 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 SERPINB2P05120 415 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 ADCY7P51828 1080 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 TDRD12Q587J7 1177 aaKnown RBP20.35■□□□□ 0.85
HOXC6-202ENST00000394331 RNF43Q68DV7 783 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 DPY19L2Q6NUT2 758 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 FOXR2Q6PJQ5 311 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 TMEM237Q96Q45 408 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 RPS6KC1Q96S38 1066 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 TXLNGQ9NUQ3 528 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 NKX1-2Q9UD57 310 aaPredicted RBP20.35■□□□□ 0.85
HOXC6-202ENST00000394331 ATP6V0A2Q9Y487 856 aa20.35■□□□□ 0.85
HOXC6-202ENST00000394331 DNA2P51530 1060 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 RNASE9P60153 205 aaKnown RBP20.34■□□□□ 0.85
HOXC6-202ENST00000394331 POU5F1Q01860 360 aaKnown RBP20.34■□□□□ 0.85
HOXC6-202ENST00000394331 SFMBT2Q5VUG0 894 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 TAOK1Q7L7X3 1001 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 AGGF1Q8N302 714 aaeCLIP20.34■□□□□ 0.85
HOXC6-202ENST00000394331 PIGOQ8TEQ8 1089 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 ATP8B4Q8TF62 1192 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 LRMDAQ9H2I8 198 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 DDX60LQ5H9U9 1706 aaKnown RBP20.34■□□□□ 0.85
HOXC6-202ENST00000394331 CEP104O60308 925 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 SHBGP04278 402 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 FCER1AP12319 257 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 RAD23BP54727 409 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 MKRN3Q13064 507 aaKnown RBP20.34■□□□□ 0.85
HOXC6-202ENST00000394331 ACVR2BQ13705 512 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 PPP2R5EQ16537 467 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 ARMC3Q5W041 872 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 DENND2CQ68D51 928 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 CDK5RAP3Q96JB5 506 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 FGD4Q96M96 766 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 DDX47Q9H0S4 455 aaKnown RBP20.34■□□□□ 0.85
HOXC6-202ENST00000394331 TTC7AQ9ULT0 858 aaPredicted RBP20.34■□□□□ 0.85
HOXC6-202ENST00000394331 ATP8A1Q9Y2Q0 1164 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 MYH4Q9Y623 1939 aa20.34■□□□□ 0.85
HOXC6-202ENST00000394331 KRIT1O00522 736 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 HOXA10P31260 410 aaPredicted RBP20.33■□□□□ 0.85
HOXC6-202ENST00000394331 ANKRD23Q86SG2 305 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 HOMEZQ8IX15 550 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 FITM2Q8N6M3 262 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 LRRC57Q8N9N7 239 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 MIPOL1Q8TD10 442 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 DNAJC9Q8WXX5 260 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms