RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 CLK1P49759 484 aaKnown RBP9.61□□□□□ -0.87
CHD2-201ENST00000394196 ARMC6Q6NXE6 501 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 PYROXD1Q8WU10 500 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 ETNK1Q9HBU6 452 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 ZNF233A6NK53 670 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 SLC26A4O43511 780 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 MFN2O95140 757 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 OTUB1Q96FW1 271 aaPredicted RBP9.61□□□□□ -0.87
CHD2-201ENST00000394196 PPARGC1AQ9UBK2 798 aaKnown RBP9.61□□□□□ -0.87
CHD2-201ENST00000394196 TROQ12816 1431 aaPredicted RBP9.61□□□□□ -0.87
CHD2-201ENST00000394196 CLTBP09497 229 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 JAK1P23458 1154 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 ABL2P42684 1182 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 KCNJ6P48051 423 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 ZBED6P86452 979 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 ZC2HC1CQ53FD0 456 aaPredicted RBP9.61□□□□□ -0.87
CHD2-201ENST00000394196 TAF1BQ53T94 588 aaPredicted RBP9.61□□□□□ -0.87
CHD2-201ENST00000394196 PIK3AP1Q6ZUJ8 805 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 TUBGCP2Q9BSJ2 902 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 NYXQ9GZU5 481 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 SNRKQ9NRH2 765 aa9.61□□□□□ -0.87
CHD2-201ENST00000394196 MIF4GDA9UHW6 222 aaKnown RBP9.6□□□□□ -0.87
CHD2-201ENST00000394196 LGALS3BPQ08380 585 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 EFTUD2Q15029 972 aaKnown RBP eCLIP9.6□□□□□ -0.871e-6■■■□□ 16.3
CHD2-201ENST00000394196 TAF8Q7Z7C8 310 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 PYCARDQ9ULZ3 195 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 HSPD1P10809 573 aaKnown RBP9.6□□□□□ -0.87
CHD2-201ENST00000394196 ZNF710Q8N1W2 664 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 RAPGEF5Q92565 580 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 GPN3Q9UHW5 284 aaPredicted RBP9.6□□□□□ -0.87
CHD2-201ENST00000394196 AQRO60306 1485 aaKnown RBP eCLIP9.6□□□□□ -0.872e-7■■■■□ 19.8
CHD2-201ENST00000394196 MATN2O00339 956 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 CACNA2D2Q9NY47 1150 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 PTPN22Q9Y2R2 807 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 PGDP52209 483 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 MAN2A1Q16706 1144 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 C19orf44Q9H6X5 657 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 HBS1LQ9Y450 684 aaKnown RBP9.6□□□□□ -0.87
CHD2-201ENST00000394196 TRIM64CA6NLI5 447 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 SNAP23O00161 211 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 TJP3O95049 919 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 SCP2P22307 547 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 MFAP3P55082 362 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 C2CD6Q53TS8 623 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 NME9Q86XW9 330 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 PIH1D3Q9NQM4 214 aaKnown RBP9.6□□□□□ -0.87
CHD2-201ENST00000394196 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.6□□□□□ -0.87
CHD2-201ENST00000394196 HACD3Q9P035 362 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 COL4A3BPQ9Y5P4 624 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 ARAP1Q96P48 1450 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 COPEO14579 308 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 NDUFA10O95299 355 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 TTC13Q8NBP0 860 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 DPF3Q92784 378 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 MIEF2Q96C03 454 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 MCM9Q9NXL9 1143 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 SPOUT1Q5T280 376 aaKnown RBP9.6□□□□□ -0.87
CHD2-201ENST00000394196 WLSQ5T9L3 541 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 ABRAXAS1Q6UWZ7 409 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 GPT2Q8TD30 523 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 ALKBH8Q96BT7 664 aaKnown RBP9.6□□□□□ -0.87
CHD2-201ENST00000394196 VPS39Q96JC1 886 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 ATP6V1G3Q96LB4 118 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 TUBA1CQ9BQE3 449 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 PLAAQ9Y263 795 aa9.6□□□□□ -0.87
CHD2-201ENST00000394196 H7C0C1 242 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 GAS2O43903 313 aaKnown RBP9.59□□□□□ -0.87
CHD2-201ENST00000394196 MED26O95402 600 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 ATP5OP48047 213 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 NFYCQ13952 458 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 DEPDC1BQ8WUY9 529 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 TNIP3Q96KP6 325 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 DHX36Q9H2U1 1008 aaKnown RBP9.59□□□□□ -0.87
CHD2-201ENST00000394196 EVLQ9UI08 416 aaPredicted RBP9.59□□□□□ -0.87
CHD2-201ENST00000394196 CBY1Q9Y3M2 126 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 UBN2Q6ZU65 1347 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 KRT87PA6NCN2 255 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 PDZK1P1A8MUH7 402 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 BRDTQ58F21 947 aaPredicted RBP9.59□□□□□ -0.87
CHD2-201ENST00000394196 MAGEB6Q8N7X4 407 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 PNPT1Q8TCS8 783 aaKnown RBP9.59□□□□□ -0.87
CHD2-201ENST00000394196 ACMSDQ8TDX5 336 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 LRCH1Q9Y2L9 728 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 CD19P15391 556 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 ITGAXP20702 1163 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 ARMC4Q5T2S8 1044 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 REXO1Q8N1G1 1221 aaKnown RBP9.59□□□□□ -0.87
CHD2-201ENST00000394196 BLOC1S5Q8TDH9 187 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 TADA1Q96BN2 335 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 FAM161BQ96MY7 647 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 BPIFA3Q9BQP9 254 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 SNAPC4Q5SXM2 1469 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 RASA4BC9J798 803 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 RASA4O43374 803 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 ALDH18A1P54886 795 aaKnown RBP9.59□□□□□ -0.87
CHD2-201ENST00000394196 TMPRSS15P98073 1019 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 EXOSC10Q01780 885 aaKnown RBP9.59□□□□□ -0.87
CHD2-201ENST00000394196 TBRG1Q3YBR2 411 aa9.59□□□□□ -0.87
CHD2-201ENST00000394196 PABPC1LQ4VXU2 614 aaKnown RBP9.59□□□□□ -0.87
CHD2-201ENST00000394196 IFNL2Q8IZJ0 200 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms