RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 NEUROG2Q9H2A3 272 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 ARHGEF10LQ9HCE6 1279 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 SLC12A6Q9UHW9 1150 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 CD2APQ9Y5K6 639 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 SCN9AQ15858 1988 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 TLDC2A0PJX2 215 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 TLR2O60603 784 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 PALMO75781 387 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 FGFR1OPO95684 399 aaKnown RBP10.8□□□□□ -0.68
PSEN1-204ENST00000394164 SPATA31C1P0DKV0 1188 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 IFNAR2P48551 515 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 RBBP5Q15291 538 aaKnown RBP10.8□□□□□ -0.68
PSEN1-204ENST00000394164 ELAC2Q9BQ52 826 aaKnown RBP10.8□□□□□ -0.68
PSEN1-204ENST00000394164 KCNMB3Q9NPA1 279 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 FBXL5Q9UKA1 691 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 CCT8L1PA6NM43 557 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 NMT1P30419 496 aaKnown RBP10.79□□□□□ -0.68
PSEN1-204ENST00000394164 ERVK-9P63128 1117 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 KCNH2Q12809 1159 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 SFMBT2Q5VUG0 894 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 PPP1R18Q6NYC8 613 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 PDXDC1Q6P996 788 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 MAB21L3Q8N8X9 362 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 C3orf20Q8ND61 904 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 UHMK1Q8TAS1 419 aaKnown RBP10.79□□□□□ -0.68
PSEN1-204ENST00000394164 TAF1DQ9H5J8 278 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-204ENST00000394164 NYAP2Q9P242 653 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 AGAP1Q9UPQ3 857 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 SH3BP1Q9Y3L3 701 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 ANKRD31Q8N7Z5 1873 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 NOL4O94818 638 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 DRD4P21917 467 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 SLC12A3P55017 1021 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 COG2Q14746 738 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 GRIPAP1Q4V328 841 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 ERICH1Q86X53 443 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 CPXCR1Q8N123 301 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 CCDC197Q8NCU1 140 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 MAGEC3Q8TD91 643 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 DCAF4Q8WV16 495 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 MTFR1LQ9H019 292 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 PNMA2Q9UL42 364 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 EVI5O60447 810 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 DNAJC8O75937 253 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-204ENST00000394164 SMNDC1O75940 238 aaKnown RBP eCLIP10.79□□□□□ -0.68
PSEN1-204ENST00000394164 EN1Q05925 392 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-204ENST00000394164 GIT2Q14161 759 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 MYCT1Q8N699 235 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 ETNPPLQ8TBG4 499 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 LENG9Q96B70 501 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 LRRC27Q9C0I9 530 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 ABCF3Q9NUQ8 709 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 PPP1R1BQ9UD71 204 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-204ENST00000394164 HDAC9Q9UKV0 1011 aa10.79□□□□□ -0.68
PSEN1-204ENST00000394164 KDM3AQ9Y4C1 1321 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 A0A087X0T9 212 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 CETN3O15182 167 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 VIMP08670 466 aaKnown RBP10.78□□□□□ -0.68
PSEN1-204ENST00000394164 FAM228BP0C875 321 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 KLHL30Q0D2K2 578 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 NBPF9Q3BBW0 867 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 DYDC2Q96IM9 177 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 NOX5Q96PH1 765 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 EIF2AK1Q9BQI3 630 aaKnown RBP10.78□□□□□ -0.68
PSEN1-204ENST00000394164 CCDC113Q9H0I3 377 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 DPH5Q9H2P9 285 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 EBF2Q9HAK2 575 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 NOP53Q9NZM5 478 aaKnown RBP10.78□□□□□ -0.68
PSEN1-204ENST00000394164 GGA2Q9UJY4 613 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 PCDHA2Q9Y5H9 948 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 TBCAO75347 108 aaKnown RBP10.78□□□□□ -0.68
PSEN1-204ENST00000394164 PDHA1P08559 390 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 HOXD13P35453 343 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 PPP1R2P41236 205 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 CYP2J2P51589 502 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 USP11P51784 963 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 STAT2P52630 851 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 SPIRE1Q08AE8 756 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 KIAA0753Q2KHM9 967 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 ZCWPW2Q504Y3 356 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 TATDN1Q6P1N9 297 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 CD302Q8IX05 232 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 KCTD10Q9H3F6 313 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 TRIM33Q9UPN9 1127 aa10.78□□□□□ -0.68
PSEN1-204ENST00000394164 MAP3K13O43283 966 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 AKAP3O75969 853 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 LINGO3P0C6S8 592 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 ALDH5A1P51649 535 aaPredicted RBP10.77□□□□□ -0.68
PSEN1-204ENST00000394164 RWDD2BP57060 319 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 ORC2Q13416 577 aaPredicted RBP10.77□□□□□ -0.68
PSEN1-204ENST00000394164 SLC9C1Q4G0N8 1177 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 LACTB2Q53H82 288 aaPredicted RBP10.77□□□□□ -0.68
PSEN1-204ENST00000394164 HGSNATQ68CP4 663 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 CC2D2BQ6DHV5 1058 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 SLFN12Q8IYM2 578 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 LARGE2Q8N3Y3 721 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 ERMNQ8TAM6 284 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 WHAMMQ8TF30 809 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 WDR18Q9BV38 432 aa10.77□□□□□ -0.68
PSEN1-204ENST00000394164 IDI2Q9BXS1 227 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms