RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 KCNV1Q6PIU1 500 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 SMC1BQ8NDV3 1235 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 RNF40O75150 1001 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 MYCP01106 439 aaPredicted RBP17.81■□□□□ 0.44
SCN3B-202ENST00000392770 STAT5BP51692 787 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 ATP11AP98196 1134 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 DEFB132Q7Z7B7 95 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 RBAKQ9NYW8 714 aaPredicted RBP17.81■□□□□ 0.44
SCN3B-202ENST00000392770 NCK2O43639 380 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 ENGASEQ8NFI3 743 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 AGO2Q9UKV8 859 aaKnown RBP17.81■□□□□ 0.44
SCN3B-202ENST00000392770 TXNP10599 105 aaKnown RBP17.81■□□□□ 0.44
SCN3B-202ENST00000392770 MRPS25P82663 173 aaKnown RBP17.81■□□□□ 0.44
SCN3B-202ENST00000392770 ARMCX2Q7L311 632 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 STMN2Q93045 179 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 CAMTA1Q9Y6Y1 1673 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 SOX5P35711 763 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 ARHGAP25P42331 645 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 DHX9Q08211 1270 aaKnown RBP17.81■□□□□ 0.44
SCN3B-202ENST00000392770 CCNYQ8ND76 341 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 ABCB6Q9NP58 842 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 TBXAS1P24557 533 aaPredicted RBP17.81■□□□□ 0.44
SCN3B-202ENST00000392770 MTF1Q14872 753 aa17.81■□□□□ 0.44
SCN3B-202ENST00000392770 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.81■□□□□ 0.44
SCN3B-202ENST00000392770 NR3C2P08235 984 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 HSPBP1Q9NZL4 362 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 RGL2O15211 777 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 NUP85Q9BW27 656 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 PLS3P13797 630 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 RFX1P22670 979 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 TOPORSQ9NS56 1045 aaPredicted RBP17.8■□□□□ 0.44
SCN3B-202ENST00000392770 ACTN1P12814 892 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 ECE1P42892 770 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 NR1I3Q14994 352 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 ANO9A1A5B4 782 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 CCDC151A5D8V7 595 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 SPDYE2BA6NHP3 402 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 SPDYE6P0CI01 402 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 TROVE2P10155 538 aaKnown RBP eCLIP17.8■□□□□ 0.44
SCN3B-202ENST00000392770 CAP2P40123 477 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 ZNF746Q6NUN9 644 aaPredicted RBP17.8■□□□□ 0.44
SCN3B-202ENST00000392770 VGLL2Q8N8G2 317 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 CCHCR1Q8TD31 782 aa17.8■□□□□ 0.44
SCN3B-202ENST00000392770 GNA15P30679 374 aa17.79■□□□□ 0.44
SCN3B-202ENST00000392770 BASP1P80723 227 aaKnown RBP17.79■□□□□ 0.44
SCN3B-202ENST00000392770 ELOA2Q8IYF1 753 aaPredicted RBP17.79■□□□□ 0.44
SCN3B-202ENST00000392770 GIPC1O14908 333 aa17.79■□□□□ 0.44
SCN3B-202ENST00000392770 ZNF18P17022 549 aa17.79■□□□□ 0.44
SCN3B-202ENST00000392770 TMEM143Q96AN5 459 aa17.79■□□□□ 0.44
SCN3B-202ENST00000392770 KCND2Q9NZV8 630 aa17.79■□□□□ 0.44
SCN3B-202ENST00000392770 ITIH6Q6UXX5 1313 aa17.79■□□□□ 0.44
SCN3B-202ENST00000392770 ARHGEF37A1IGU5 675 aa17.79■□□□□ 0.44
SCN3B-202ENST00000392770 TOB1P50616 345 aaPredicted RBP17.79■□□□□ 0.44
SCN3B-202ENST00000392770 SNAPC2Q13487 334 aa17.79■□□□□ 0.44
SCN3B-202ENST00000392770 CALR3Q96L12 384 aaKnown RBP17.79■□□□□ 0.44
SCN3B-202ENST00000392770 EHD4Q9H223 541 aa17.79■□□□□ 0.44
SCN3B-202ENST00000392770 TWF2Q6IBS0 349 aaKnown RBP17.79■□□□□ 0.44
SCN3B-202ENST00000392770 NFRKBQ6P4R8 1299 aa17.79■□□□□ 0.44
SCN3B-202ENST00000392770 SCYL3Q8IZE3 742 aa17.79■□□□□ 0.44
SCN3B-202ENST00000392770 BEST2Q8NFU1 509 aa17.79■□□□□ 0.44
SCN3B-202ENST00000392770 ZNF564Q8TBZ8 553 aaPredicted RBP17.79■□□□□ 0.44
SCN3B-202ENST00000392770 FBXO38Q6PIJ6 1188 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 ARHGEF18Q6ZSZ5 1173 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 TMEM35BQ8NCS4 154 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 ATG4CQ96DT6 458 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 C11orf70Q9BRQ4 267 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 GGPS1O95749 300 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 XKR3Q5GH77 459 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 PLA2G4FQ68DD2 849 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 LMBRD2Q68DH5 695 aaPredicted RBP17.78■□□□□ 0.44
SCN3B-202ENST00000392770 CYP4F22Q6NT55 531 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 CATSPER3Q86XQ3 398 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 ACER1Q8TDN7 264 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 CDKL2Q92772 493 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 RILPQ96NA2 401 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 HDAC6Q9UBN7 1215 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 DDTLA6NHG4 134 aaPredicted RBP17.78■□□□□ 0.44
SCN3B-202ENST00000392770 OR6J1Q8NGC5 347 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 NFU1Q9UMS0 254 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 AKAP12Q02952 1782 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 ANXA13P27216 316 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 CCZ1BP86790 482 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 CCZ1P86791 482 aaPredicted RBP17.78■□□□□ 0.44
SCN3B-202ENST00000392770 ZSCAN26Q16670 478 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 CACNA2D3Q8IZS8 1091 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 RNF149Q8NC42 400 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 WHAMMQ8TF30 809 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 ZKSCAN4Q969J2 545 aaPredicted RBP17.78■□□□□ 0.44
SCN3B-202ENST00000392770 RASSF4Q9H2L5 321 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 UBE4BO95155 1302 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 PPP1R3GB7ZBB8 358 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 DGAT1O75907 488 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 FTLP02792 175 aaPredicted RBP17.78■□□□□ 0.44
SCN3B-202ENST00000392770 CALB1P05937 261 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 INHBAP08476 426 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 GARSP41250 739 aaKnown RBP17.78■□□□□ 0.44
SCN3B-202ENST00000392770 TAAR1Q96RJ0 339 aa17.78■□□□□ 0.44
SCN3B-202ENST00000392770 MOV10L1Q9BXT6 1211 aaKnown RBP17.78■□□□□ 0.44
SCN3B-202ENST00000392770 SAT1P21673 171 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 MCUR1Q96AQ8 359 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms