RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 HOOK2Q96ED9 719 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 IKZF4Q9H2S9 585 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 GCNT4Q9P109 453 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 AFPP02771 609 aaKnown RBP11.76□□□□□ -0.53
BRF1-204ENST00000392557 VIMP08670 466 aaKnown RBP11.76□□□□□ -0.53
BRF1-204ENST00000392557 UCHL3P15374 230 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 NF2P35240 595 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 SLCO1A2P46721 670 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 PLTPP55058 493 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 R3HDM1Q15032 1099 aaKnown RBP11.76□□□□□ -0.53
BRF1-204ENST00000392557 MICALL2Q8IY33 904 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 CCDC13Q8IYE1 715 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 METTL13Q8N6R0 699 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 AGBL3Q8NEM8 1001 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 EIF2AK1Q9BQI3 630 aaKnown RBP11.76□□□□□ -0.53
BRF1-204ENST00000392557 RAVER2Q9HCJ3 691 aaKnown RBP11.76□□□□□ -0.53
BRF1-204ENST00000392557 C10orf71Q711Q0 1435 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 FRMD3A2A2Y4 597 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 CTNND1O60716 968 aaKnown RBP11.76□□□□□ -0.53
BRF1-204ENST00000392557 FAM107AO95990 144 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 CASP5P51878 434 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
BRF1-204ENST00000392557 GKAP1Q5VSY0 366 aaPredicted RBP11.76□□□□□ -0.53
BRF1-204ENST00000392557 KCNV1Q6PIU1 500 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 LENG9Q96B70 501 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 TBC1D31Q96DN5 1066 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 DYDC2Q96IM9 177 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 REEP2Q9BRK0 252 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 KLC4Q9NSK0 619 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 AMFRQ9UKV5 643 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 MRPL11Q9Y3B7 192 aaKnown RBP11.76□□□□□ -0.53
BRF1-204ENST00000392557 RABGAP1Q9Y3P9 1069 aa11.76□□□□□ -0.53
BRF1-204ENST00000392557 LCA5LO95447 670 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 FLT3P36888 993 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 PNMA8AQ86V59 439 aaPredicted RBP11.75□□□□□ -0.53
BRF1-204ENST00000392557 SCFD1Q8WVM8 642 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 WDR18Q9BV38 432 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 EDEM3Q9BZQ6 932 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 BAIAP2L1Q9UHR4 511 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 GOLGA6L10A0A0M3HER8 536 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 PPP1R12BO60237 982 aaPredicted RBP11.75□□□□□ -0.53
BRF1-204ENST00000392557 CPP00450 1065 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 GMPSP49915 693 aaPredicted RBP11.75□□□□□ -0.53
BRF1-204ENST00000392557 ASTE1Q2TB18 679 aaPredicted RBP11.75□□□□□ -0.53
BRF1-204ENST00000392557 BTNL9Q6UXG8 535 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 SUGP1Q8IWZ8 645 aaKnown RBP11.75□□□□□ -0.53
BRF1-204ENST00000392557 MGARPQ8TDB4 240 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 CTNNBL1Q8WYA6 563 aaPredicted RBP11.75□□□□□ -0.53
BRF1-204ENST00000392557 PBKQ96KB5 322 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 INPP4AQ96PE3 977 aaPredicted RBP11.75□□□□□ -0.53
BRF1-204ENST00000392557 PLCD4Q9BRC7 762 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■□□□ 11.8
BRF1-204ENST00000392557 ZNF577Q9BSK1 485 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 ISCUQ9H1K1 167 aa11.75□□□□□ -0.53
BRF1-204ENST00000392557 NFIBO00712 420 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 LRRN2O75325 713 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 MYCLP12524 364 aaPredicted RBP11.74□□□□□ -0.53
BRF1-204ENST00000392557 PPP2R2AP63151 447 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 CUL1Q13616 776 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 ARSHQ5FYA8 562 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 NSMFQ6X4W1 530 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 GLYCTKQ8IVS8 523 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 CEP63Q96MT8 703 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 CEP89Q96ST8 783 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 RUSC1Q9BVN2 902 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 TMBIM4Q9HC24 238 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 HAUS2Q9NVX0 235 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 NAGPAQ9UK23 515 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 CYP3A7-CYP3A51PA0A087WV96 503 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 BUB1BO60566 1050 aaPredicted RBP11.74□□□□□ -0.53
BRF1-204ENST00000392557 SPATA31C1P0DKV0 1188 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 ARP10275 920 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 CYP3A7P24462 503 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 STAT1P42224 750 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 ITGB3BPQ13352 177 aaPredicted RBP11.74□□□□□ -0.53
BRF1-204ENST00000392557 MTMR2Q13614 643 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 PPP1R7Q15435 360 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 KSR1Q8IVT5 923 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 TRIM59Q8IWR1 403 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 BANK1Q8NDB2 785 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 FAM20AQ96MK3 541 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 SNX24Q9Y343 169 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 DCDC2CA8MYV0 355 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 RPSAP08865 295 aaKnown RBP11.74□□□□□ -0.53
BRF1-204ENST00000392557 MYBP10242 640 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 RPA1P27694 616 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 CYP2J2P51589 502 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 SPP2Q13103 211 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 MTMR3Q13615 1198 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 TNIP1Q15025 636 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 Q4G0T1 1027 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 GRIPAP1Q4V328 841 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 MYCT1Q8N699 235 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 PIK3R5Q8WYR1 880 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 ELMO3Q96BJ8 720 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 FMO2Q99518 471 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 NEUROG2Q9H2A3 272 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 CNOT7Q9UIV1 285 aaKnown RBP11.74□□□□□ -0.53
BRF1-204ENST00000392557 PCDHGC5Q9Y5F6 944 aa11.74□□□□□ -0.53
BRF1-204ENST00000392557 CALUO43852 315 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms